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Nocardia farcinica IFM 10152 (nfar0)
Gene : panD
DDBJ      :panD         putative aspartate 1-decarboxylase
Swiss-Prot:PAND_NOCFA   RecName: Full=Aspartate 1-decarboxylase;         EC=4.1.1.11;AltName: Full=Aspartate alpha-decarboxylase;Contains:  RecName: Full=Aspartate 1-decarboxylase beta chain;Contains:  RecName: Full=Aspartate 1-decarboxylase alpha chain;Flags: Precursor;

Homologs  Archaea  3/68 : Bacteria  493/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.52.2
:139 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->113 2c45A PDBj 1e-41 80.5 %
:RPS:PDB   1->113 2c45A PDBj 5e-49 70.8 %
:RPS:SCOP  1->113 1aw8.1  b.52.2.1 * 2e-19 41.6 %
:HMM:SCOP  1->118 1ppyA_ b.52.2.1 * 3.1e-49 63.6 %
:RPS:PFM   1->113 PF02261 * Asp_decarbox 3e-37 63.7 %
:HMM:PFM   1->114 PF02261 * Asp_decarbox 1.6e-55 64.0 114/116  
:BLT:SWISS 1->139 PAND_NOCFA 7e-70 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55249.1 GT:GENE panD GT:PRODUCT putative aspartate 1-decarboxylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 426946..427365 GB:FROM 426946 GB:TO 427365 GB:DIRECTION + GB:GENE panD GB:PRODUCT putative aspartate 1-decarboxylase GB:PROTEIN_ID BAD55249.1 LENGTH 139 SQ:AASEQ MLRTMMKSKIHRATVTHADLHYVGSVTVDQDLLDAADLLEGEQVCIVDIDNGARLETYVIAGERGSGVIGINGAAAHLVHPGDLVILIAYGMMNEQEIAEYDPKVVFVDERNRPVELGSDPAHAPEGSGLTSPRSLTFA GT:EXON 1|1-139:0| SW:ID PAND_NOCFA SW:DE RecName: Full=Aspartate 1-decarboxylase; EC=4.1.1.11;AltName: Full=Aspartate alpha-decarboxylase;Contains: RecName: Full=Aspartate 1-decarboxylase beta chain;Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain;Flags: Precursor; SW:GN Name=panD; OrderedLocusNames=NFA_4070; SW:KW Autocatalytic cleavage; Complete proteome; Cytoplasm; Decarboxylase;Lyase; Pantothenate biosynthesis; Pyruvate; Schiff base; Zymogen. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->139|PAND_NOCFA|7e-70|100.0|139/139| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016831|"GO:carboxy-lyase activity"|Decarboxylase| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0015940|"GO:pantothenate biosynthetic process"|Pantothenate biosynthesis| SEG 29->39|dqdlldaadll| BL:PDB:NREP 1 BL:PDB:REP 1->113|2c45A|1e-41|80.5|113/113| RP:PDB:NREP 1 RP:PDB:REP 1->113|2c45A|5e-49|70.8|113/113| RP:PFM:NREP 1 RP:PFM:REP 1->113|PF02261|3e-37|63.7|113/116|Asp_decarbox| HM:PFM:NREP 1 HM:PFM:REP 1->114|PF02261|1.6e-55|64.0|114/116|Asp_decarbox| GO:PFM:NREP 2 GO:PFM GO:0004068|"GO:aspartate 1-decarboxylase activity"|PF02261|IPR003190| GO:PFM GO:0006523|"GO:alanine biosynthetic process"|PF02261|IPR003190| RP:SCP:NREP 1 RP:SCP:REP 1->113|1aw8.1|2e-19|41.6|113/115|b.52.2.1| HM:SCP:REP 1->118|1ppyA_|3.1e-49|63.6|118/0|b.52.2.1|1/1|ADC-like| OP:NHOMO 509 OP:NHOMOORG 497 OP:PATTERN ---------------------11-----1--------------------------------------- ----1--11111-111111-111121111111111111111121--1-111-211111--111-1111111---------1--1111111111111---11111111111---------------11111111111-----1111-111-111----------11-21111------------11111---211111111111111111111111111111111111111121-11111111111111111111-----------1---------------------------------------------------------1--111111211-111-111-----11---111111211--1111-11---111111-----111---------------------------1---2---11---1------1111-----------------------11------------------------------------1111-1111111111111111111111111-1--111111-1111212-1111111111111111-----11---111-1-1----1-1---111111111111111111111-11111111111111----1--1----1----------------------1111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111----11111111111-11---------------1111111111111111---------1---1111111111--------------1111111111111111--111111------------------------------------11-1111111--1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 123 STR:RPRED 88.5 SQ:SECSTR cEEEcccEEEEEEEcccEEcccccEEEEEHHHHHHTTccccccEEEEETTTccEEEEcEEEEcTTTTcEEEEccTTTTccTTcEEEEEEccEEEHHHHHccccEEEEccTTccEEEEEccccc################ PSIPRED cHHHHHHcEEcEEEEEccEEEEEEEEEEcHHHHHHcccccccEEEEEEcccccEEEEEEEEcccccEEEEEcHHHHcccccccEEEEEEEccccHHHHHHcccEEEEEcccccEEEEEcccccccccccccccEEEEEc //