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Nocardia farcinica IFM 10152 (nfar0)
Gene : pheS
DDBJ      :pheS         putative phenylalanyl-tRNA synthetase alpha subunit
Swiss-Prot:SYFA_NOCFA   RecName: Full=Phenylalanyl-tRNA synthetase alpha chain;         EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase alpha chain;         Short=PheRS;

Homologs  Archaea  67/68 : Bacteria  910/915 : Eukaryota  183/199 : Viruses  0/175   --->[See Alignment]
a.2.7d.104.1
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   96->338 2rhsA PDBj 2e-61 50.4 %
:RPS:PDB   32->340 1eiyA PDBj 1e-35 39.3 %
:RPS:SCOP  96->340 1b70A  d.104.1.1 * 2e-34 44.7 %
:HMM:SCOP  16->103 1eiyA1 a.2.7.2 * 2.9e-17 40.5 %
:HMM:SCOP  95->339 1pysA_ d.104.1.1 * 1.2e-70 41.3 %
:RPS:PFM   103->336 PF01409 * tRNA-synt_2d 4e-70 56.4 %
:HMM:PFM   96->335 PF01409 * tRNA-synt_2d 6.5e-99 51.7 238/247  
:HMM:PFM   21->89 PF02912 * Phe_tRNA-synt_N 3.8e-19 39.1 69/73  
:BLT:SWISS 32->342 SYFA_NOCFA e-152 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56764.1 GT:GENE pheS GT:PRODUCT putative phenylalanyl-tRNA synthetase alpha subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2094609..2095637 GB:FROM 2094609 GB:TO 2095637 GB:DIRECTION + GB:GENE pheS GB:PRODUCT putative phenylalanyl-tRNA synthetase alpha subunit GB:PROTEIN_ID BAD56764.1 LENGTH 342 SQ:AASEQ MDLSEEALAAAAADAEKAFAAAADLDALAVAKTEHLGGKAPLALAQRALGALPKEEKKDAGKRVNVARGRVAEAFEARRAVLLAERDAAVLVAEAIDVTLPARRQQVGARHPITVISERIADVFVAMGWEVAEGPEVETEHFNFDALNFLPDHPARTMQDTFHIAPEGSRQVLRTHTSPVQVRSMLERDLPIYVVCPGRTFRTDELDATHTPVFSQVEGLAVDKGLTMAHLRGTLDAFARALFGPETRTRMRPNYFPFTEPSAEVDVWFPDKKGGAGWVEWGGCGMVNPKVLIASGIDPEVYSGFAFGMGLERTLQFRNGIPDMRDIVEGDVRFTLPFGIQS GT:EXON 1|1-342:0| SW:ID SYFA_NOCFA SW:DE RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS; SW:GN Name=pheS; OrderedLocusNames=NFA_19180; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 32->342|SYFA_NOCFA|e-152|100.0|311/342| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 5->31|eealaaaaadaekafaaaadldalava| SEG 66->95|vargrvaeafearravllaerdaavlvaea| SEG 274->285|ggagwvewggcg| BL:PDB:NREP 1 BL:PDB:REP 96->338|2rhsA|2e-61|50.4|230/249| RP:PDB:NREP 1 RP:PDB:REP 32->340|1eiyA|1e-35|39.3|308/345| RP:PFM:NREP 1 RP:PFM:REP 103->336|PF01409|4e-70|56.4|227/229|tRNA-synt_2d| HM:PFM:NREP 2 HM:PFM:REP 96->335|PF01409|6.5e-99|51.7|238/247|tRNA-synt_2d| HM:PFM:REP 21->89|PF02912|3.8e-19|39.1|69/73|Phe_tRNA-synt_N| GO:PFM:NREP 5 GO:PFM GO:0000049|"GO:tRNA binding"|PF01409|IPR002319| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF01409|IPR002319| GO:PFM GO:0005524|"GO:ATP binding"|PF01409|IPR002319| GO:PFM GO:0005737|"GO:cytoplasm"|PF01409|IPR002319| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF01409|IPR002319| RP:SCP:NREP 1 RP:SCP:REP 96->340|1b70A|2e-34|44.7|244/266|d.104.1.1| HM:SCP:REP 16->103|1eiyA1|2.9e-17|40.5|79/79|a.2.7.2|1/1|tRNA-binding arm| HM:SCP:REP 95->339|1pysA_|1.2e-70|41.3|242/266|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1304 OP:NHOMOORG 1160 OP:PATTERN 111111111111111111111111111111111111111111111111111111111111111111-1 1111111111111111111-11111111111111111111111111111111212111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111221211111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 1111221-311111221111222121111111111111111112222122111122212111222111-212222-1-1112222221-24211122222222222124241312111-1-11131122271-113-11111-11-11--1--11-11143222211121412122222P2211222431223321221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 311 STR:RPRED 90.9 SQ:SECSTR ###############################HHHHHHHHHHHHHHHHcccccTTcTTTHHHHTTHHHHTHHHHHHHHHHHTTHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHTTTcEEcccccEEETTTTTTTTTcccccTTGGGccccccccccccEEEccccTHHHHHHHHHccccEEEEEEEEEEcccccccccccEEEEEEEEEEETTccHHHHHHHHHHHHHHHHcTTccEEEEEcccTTEEEEEEEEEEcGcEEEEEEcHHHHHHHHHHHHHTHTccccccccEEEEEEEEHHHHHHHTTTcccTHHHHTTcHHHHGGGcccc DISOP:02AL 1-3| PSIPRED ccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEccEEEccccHHHcccccccccccccccEEEEEEcccccEEEEcccHHHHHHHHHccccEEEEEEccEEEcccccccccHHHHEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEEEEEccccccccEEEEEccccccHHHHHHcccccccEEEEEEEccHHHHHHHHHccHHHHHHHcccHHHHHHccccc //