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Nocardia farcinica IFM 10152 (nfar0)
Gene : pheT
DDBJ      :pheT         putative phenylalanyl-tRNA synthetase beta subunit
Swiss-Prot:SYFB_NOCFA   RecName: Full=Phenylalanyl-tRNA synthetase beta chain;         EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain;         Short=PheRS;

Homologs  Archaea  2/68 : Bacteria  885/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.153.1b.40.4c.23.3d.104.1d.58.13
:834 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->810 2rhsD PDBj 2e-76 32.0 %
:RPS:PDB   1->810 1b70B PDBj e-142 33.0 %
:RPS:SCOP  54->208 1e7zA  b.40.4.4 * 2e-24 15.2 %
:RPS:SCOP  206->409 1b70B6  b.153.1.1 * 2e-40 45.3 %
:RPS:SCOP  424->518 1eiwA  c.23.3.1 * 2e-09 10.5 %
:RPS:SCOP  490->730 1b70B5  d.104.1.1 * 6e-31 26.8 %
:RPS:SCOP  739->810 1b70B4  d.58.13.1 * 4e-15 37.5 %
:HMM:SCOP  50->211 1ntgA_ b.40.4.4 * 5.9e-33 38.1 %
:HMM:SCOP  205->410 1pysB6 b.153.1.1 * 1.7e-73 52.2 %
:HMM:SCOP  412->492 1pysB2 a.6.1.1 * 2.5e-15 37.3 %
:HMM:SCOP  483->729 1pysB5 d.104.1.1 * 1.7e-38 35.8 %
:HMM:SCOP  734->833 1pysB4 d.58.13.1 * 1.6e-25 43.0 %
:RPS:PFM   54->156 PF01588 * tRNA_bind 3e-11 45.5 %
:RPS:PFM   226->393 PF03483 * B3_4 5e-44 57.5 %
:RPS:PFM   365->476 PF03249 * TSA 2e-04 32.1 %
:RPS:PFM   740->810 PF03147 * FDX-ACB 6e-14 45.1 %
:HMM:PFM   223->396 PF03483 * B3_4 7.4e-71 60.3 174/174  
:HMM:PFM   740->833 PF03147 * FDX-ACB 9.3e-26 41.5 94/94  
:HMM:PFM   54->157 PF01588 * tRNA_bind 2.3e-19 34.8 89/95  
:HMM:PFM   413->486 PF03484 * B5 8.7e-15 33.3 69/70  
:BLT:SWISS 1->810 SYFB_NOCFA 0.0 100.0 %
:PROS 94->108|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56765.1 GT:GENE pheT GT:PRODUCT putative phenylalanyl-tRNA synthetase beta subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2095670..2098174 GB:FROM 2095670 GB:TO 2098174 GB:DIRECTION + GB:GENE pheT GB:PRODUCT putative phenylalanyl-tRNA synthetase beta subunit GB:PROTEIN_ID BAD56765.1 LENGTH 834 SQ:AASEQ MRVAQSWLTEIIERTNAGWSVTPEELDAGFVRVGLEVEEVDRLERVGGDIERPLVVGRVAEITELTEFKKPIRFCKVDVGAPELQEIICGARNFAVGDLVVVVLPGGVLPGGFRITSRKTYGHVSNGMICSVAELGIGKDHSGILVLEPGTAEPGTDANELLGLDDTVIELNITPDRGYCFSVRGLARELACGFDLEYLDPAVRTLPEDAAEAWPITIEPASQCTRFAARRVTGIDPNAVSPWWLQRRLLLSGVRPISPAVDVTNYVMLELGQPLHAFDAAKLSGGLVVRTAKPGEKLRTLDDTERTLDAEDVVIADDSGAVSLAGIMGGASTEVGEGTTDVLLEAATWNPLLVYRTARRHKLVSEAGKRYERVVDPEINVAALDRAATLLAEIAGGTVEPVLSDVRVPTPAPEPIRMDIDLPDRVAGVAYPTGTAARRLAQIGCHVEVSVDEESGHGQLVVTPPSWRPDLAQPADLVEEVLRLEGLEQIPSVVPTAPAGRGLTPEQRRRRAVSRALAFAGGVEVPPPVFLPAGVFDTWGLDADDPRRTTTRVLNPLDVERAELATTLLPGLLEVAQRNISRGARDLTLYGIAQVVLPTGDTKPVAPLPVDRRPTDEQIAELLGSLPDQPVHVAAVLTGRREPRGPWGPGRQAEAADAFALVDAVADAAGVVIERRPAAYLPWHPGRCAELVVEGRVVGYAGELHPAVLERSGLPARTCALELDLDALPLRESRPVPVVSPFPAVLQDVSVSVSKSVAAAAVESALRSGGGELLEDIALFDVYEGAQAGEGRKSLTYALRFRAPDRTLTEDEASAARDAAVAAAADAVGAVLRG GT:EXON 1|1-834:0| SW:ID SYFB_NOCFA SW:DE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS; SW:GN Name=pheT; OrderedLocusNames=NFA_19190; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis; RNA-binding; tRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->810|SYFB_NOCFA|0.0|100.0|810/834| GO:SWS:NREP 9 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0000049|"GO:tRNA binding"|tRNA-binding| PROS 94->108|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 31->48|vrvgleveevdrlervgg| SEG 96->112|vgdlvvvvlpggvlpgg| SEG 477->488|lveevlrlegle| SEG 639->651|grreprgpwgpgr| SEG 653->672|aeaadafalvdavadaagvv| SEG 749->765|vsvsvsksvaaaavesa| SEG 811->831|deasaardaavaaaadavgav| BL:PDB:NREP 1 BL:PDB:REP 54->810|2rhsD|2e-76|32.0|709/785| RP:PDB:NREP 1 RP:PDB:REP 1->810|1b70B|e-142|33.0|743/775| RP:PFM:NREP 4 RP:PFM:REP 54->156|PF01588|3e-11|45.5|99/100|tRNA_bind| RP:PFM:REP 226->393|PF03483|5e-44|57.5|167/172|B3_4| RP:PFM:REP 365->476|PF03249|2e-04|32.1|109/468|TSA| RP:PFM:REP 740->810|PF03147|6e-14|45.1|71/94|FDX-ACB| HM:PFM:NREP 4 HM:PFM:REP 223->396|PF03483|7.4e-71|60.3|174/174|B3_4| HM:PFM:REP 740->833|PF03147|9.3e-26|41.5|94/94|FDX-ACB| HM:PFM:REP 54->157|PF01588|2.3e-19|34.8|89/95|tRNA_bind| HM:PFM:REP 413->486|PF03484|8.7e-15|33.3|69/70|B5| GO:PFM:NREP 11 GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| GO:PFM GO:0003723|"GO:RNA binding"|PF03483|IPR005146| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03483|IPR005146| GO:PFM GO:0006412|"GO:translation"|PF03483|IPR005146| GO:PFM GO:0016021|"GO:integral to membrane"|PF03249|IPR004933| GO:PFM GO:0000049|"GO:tRNA binding"|PF03147|IPR005121| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03147|IPR005121| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03147|IPR005121| GO:PFM GO:0005524|"GO:ATP binding"|PF03147|IPR005121| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03147|IPR005121| GO:PFM GO:0008033|"GO:tRNA processing"|PF03147|IPR005121| RP:SCP:NREP 5 RP:SCP:REP 54->208|1e7zA|2e-24|15.2|145/173|b.40.4.4| RP:SCP:REP 206->409|1b70B6|2e-40|45.3|203/209|b.153.1.1| RP:SCP:REP 424->518|1eiwA|2e-09|10.5|95/111|c.23.3.1| RP:SCP:REP 490->730|1b70B5|6e-31|26.8|205/207|d.104.1.1| RP:SCP:REP 739->810|1b70B4|4e-15|37.5|72/94|d.58.13.1| HM:SCP:REP 50->211|1ntgA_|5.9e-33|38.1|155/0|b.40.4.4|1/1|Nucleic acid-binding proteins| HM:SCP:REP 205->410|1pysB6|1.7e-73|52.2|205/209|b.153.1.1|1/1|PheT/TilS domain| HM:SCP:REP 412->492|1pysB2|2.5e-15|37.3|75/75|a.6.1.1|1/1|Putative DNA-binding domain| HM:SCP:REP 483->729|1pysB5|1.7e-38|35.8|204/207|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 734->833|1pysB4|1.6e-25|43.0|100/104|d.58.13.1|1/1|Anticodon-binding domain of PheRS| OP:NHOMO 890 OP:NHOMOORG 889 OP:PATTERN -----------------------------------------------------1----------1--- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111-1111111111111-111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------11111--1----11-----11-11111111111111111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 800 STR:RPRED 95.9 SQ:SECSTR cEEEHHHHHTTcTTcccH#HHHHHHHHHTccEEEEEEcccccT#########TEEEEEEEEEEEETTTTccEEEEEEEcccccEEEEEEcccccTTcEEEEEcTTccccccccccccEEccccEEccEEccHHHHTcccccccccccEcTTcccTTccGGGTccccEEEEEcccTTcGGGGcHHHHHHHHHTTcccccccccccEEEEEGEEccccEEccTTTccEEEEEEEEcccccccccHHHHHHHHHTTcccccHHHHHHHHHHHHccccEEEEEGGGTcTEEEEEEccTTcEEEcTTccEEEccTTcEEEEEEETTEEETTTEEcTTTcccTTccEEEEEEEEccHHHHHHHHHHTTcccHHHHHHHHcccTTcHHHHHHHHHHHHHHHTccEEEcccEEEHccccccccEEEcHHHHHHHHTccccHHHHHHHHHHTTcEEEccccHHHHTTcEEEEccTTccccccHHHHHHHHHHHHcGGGccccccccGGGccTTHHHHHHHHHHHHHHHHTcEEcccccEEcTTHHHHTTccccccccccccccccccGGGcEEccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccEEEEEEEEEEcccEEEEEEEEEEccccccEEccHHHHHHHHHTTTTccEEEEEEcTTccHHHHHHHHHHHTcccEEEccccTTccTTcccEEEETTEEEEEEEEccHHHHHHTTcccccEEEEEEEcccccccHcccccccccccEEEEEcccEEccccHHHHHHHHHHHccTTEEEEEEEEccccTTccTTEEccEEEEEEccccccccH######################## DISOP:02AL 834-835| PSIPRED ccccHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHcccccccEEEEEEEEEEEccccccEEEEEEEEcccccEEEEEcccHHHccccEEEEEEEccEEccccEEEEEEccccEEEEEEEcHHHcccccccccEEEEcHHHcccccccHHcccccccEEEEEccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEcccccccEEEEEEEEccccccccHHHHHHHHHHcccccHHHccccEEEEEEccccEEEEccHHHccccEEEEEcccccEEEEEccEEEEcccccEEEEcccEEEEEccccccccccccccccEEEEEEEcccHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccccEEEEEHHHHHHHHcccccHHHHHHHHHHcccEEEEcccccccccEEEEEccccccccccHHHHHHHHHHHHcHHHcccccccccccccccHHHHHHHHHHHHHHHccccEEEcHHcccHHHHHHHccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEccccccccccccccccccHHHHHHHHccccccEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccEEEEEEccEEEEEEEEEcHHHHHHccccccEEEEEEEHHHHHHccccccccccccccccccEEEEEcccccHHHHHHHHHHccccEEEEEEEEEEEccccccccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcEEEcc //