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Nocardia farcinica IFM 10152 (nfar0)
Gene : pncA
DDBJ      :pncA         putative nicotinamidase
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  360/915 : Eukaryota  96/199 : Viruses  0/175   --->[See Alignment]
c.33.1
:189 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->182 1im5A PDBj 1e-28 42.6 %
:RPS:PDB   2->188 3eefA PDBj 2e-27 23.2 %
:RPS:SCOP  2->182 1ilwA  c.33.1.3 * 9e-32 37.6 %
:HMM:SCOP  1->183 1nbaA_ c.33.1.3 * 6.9e-46 38.5 %
:RPS:PFM   4->185 PF00857 * Isochorismatase 1e-28 45.6 %
:HMM:PFM   4->182 PF00857 * Isochorismatase 5.3e-34 34.9 166/174  
:BLT:SWISS 3->182 PNCA_ECOLI 8e-27 42.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55929.1 GT:GENE pncA GT:PRODUCT putative nicotinamidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1202900..1203469) GB:FROM 1202900 GB:TO 1203469 GB:DIRECTION - GB:GENE pncA GB:PRODUCT putative nicotinamidase GB:PROTEIN_ID BAD55929.1 LENGTH 189 SQ:AASEQ MRRALIIVDVQNDFCEGGSLAVTGGAAVADRISDHVTGSDYAAVVATRDYHIDPGPHFSTAPDYVDSWPPHCRVGTPGADFHPNLDTAGVQEIFSKGEYSAAYSGFEGAAADGTALAEWLRDRGIDAVDVVGIATDHCVRATALDARTAGFDTRVLLNLTAGVAPETVDKALVQLREAGVELAGELPGR GT:EXON 1|1-189:0| BL:SWS:NREP 1 BL:SWS:REP 3->182|PNCA_ECOLI|8e-27|42.9|177/213| BL:PDB:NREP 1 BL:PDB:REP 4->182|1im5A|1e-28|42.6|169/179| RP:PDB:NREP 1 RP:PDB:REP 2->188|3eefA|2e-27|23.2|168/168| RP:PFM:NREP 1 RP:PFM:REP 4->185|PF00857|1e-28|45.6|169/173|Isochorismatase| HM:PFM:NREP 1 HM:PFM:REP 4->182|PF00857|5.3e-34|34.9|166/174|Isochorismatase| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00857|IPR000868| GO:PFM GO:0008152|"GO:metabolic process"|PF00857|IPR000868| RP:SCP:NREP 1 RP:SCP:REP 2->182|1ilwA|9e-32|37.6|173/179|c.33.1.3| HM:SCP:REP 1->183|1nbaA_|6.9e-46|38.5|174/253|c.33.1.3|1/1|Isochorismatase-like hydrolases| OP:NHOMO 492 OP:NHOMOORG 466 OP:PATTERN ---1-------------------1------------------------------1111111---1--- 1---111111111111111-11--111111111111111112111111111-1111111111112121131----111-1--11-111------1----11--1----1------------------------------------------------------------------------------------------11------1---11----------1-------1--------------------------------------------111-------------------------------------------------1111111-1----------------------------1----1--------1111111-212--------11111111111-1111111111--11111111111111---1111111111111111111111--11------------------------------------111-11111111111---111111111-1111--111--------111-------1---111-1--1-----1------1-----121-1111-11-1-------------------------------11-----1--1----------------------1111------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111-----1-1111111--1----------------1111111---1-11111-1-1-----111--------------11111----111---------111--11-------111--1--------1---1--------2-------1----11111-2- ----111-2121---11111111111111111111111-1-11---111111-1111-11111--111111--1-111111--11-11--1-11111---1--11----13------------------------------------------------1122-2---112121-1-11711-1-----1----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 188 STR:RPRED 99.5 SQ:SECSTR GcEEEEEEccHHHHTcTTccHHHHHHHHHHHHHHHHHHTTTccEEEEEEcccTTcTTHHcGGGEEEEHHccccTTcGGGcccGGGcccTTcEEEEEccccTTTTcTTTcccHTcccHHHHHHTTccEEEEEEEcTTTHHHHHHHHHHHTTcEEEEEEEEEEccccTTHHHHHHHHHccEEEcTTcccc# PSIPRED ccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccHHHcccccccccccEEEEccccccccccccccccccccHHHHHHHccccEEEEEEEcHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHcccEEEEccccc //