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Nocardia farcinica IFM 10152 (nfar0)
Gene : pncB
DDBJ      :pncB         putative nicotinate phosphoribosyltransferase
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  353/915 : Eukaryota  71/199 : Viruses  0/175   --->[See Alignment]
c.1.17d.41.2
:438 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->418 2f7fA PDBj 5e-44 33.3 %
:RPS:PDB   10->415 3dhfA PDBj 2e-53 16.5 %
:RPS:SCOP  10->136 2f7fA2  d.41.2.1 * 2e-30 27.6 %
:RPS:SCOP  153->415 1ytdA1  c.1.17.1 * 1e-56 26.5 %
:HMM:SCOP  5->139 2f7fA2 d.41.2.1 * 7.1e-35 43.0 %
:HMM:SCOP  140->435 2f7fA1 c.1.17.1 * 6.8e-99 44.5 %
:RPS:PFM   156->360 PF04095 * NAPRTase 9e-26 42.7 %
:HMM:PFM   156->349 PF04095 * NAPRTase 6.7e-15 25.7 191/245  
:BLT:SWISS 13->434 PNCB_MYCTU e-125 66.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55930.1 GT:GENE pncB GT:PRODUCT putative nicotinate phosphoribosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1203507..1204823) GB:FROM 1203507 GB:TO 1204823 GB:DIRECTION - GB:GENE pncB GB:PRODUCT putative nicotinate phosphoribosyltransferase GB:PROTEIN_ID BAD55930.1 LENGTH 438 SQ:AASEQ MDIRDQVTTSTALLTDQYELTMLAAALADGSAARTCAFEVFARRLPHGRRYGVVAGTGRLLEALRHFRFGEPELAVVAGFLDERTLNWLREYRFTGDIDGYPEGELYFPGSPILSVRGSFAECVVLETLILSIFNHDSAIASAAARMVSAADGRRMIEMGSRRTHEAAAPAAARAAYLAGFDATSNLEAVRRYGVPGAGTSAHAFTLLHSGRDGAHEAEAFRSQVAALGVGTTLLVDTFDITEGVATAIRVAGPELGGVRIDSGDLGVLARQVREQLDALGATKTRIVVSGDLDEYAIAALRAEPVDVYGVGTSLVTGSGAPTAGMVYKLVEVEGVPVVKRSSHKESRGGAKRALRLTKSSGTIVEEIVYPATAEPPPTDGFEARQLLVPLVRGGAVVDDLPTLTDARDLVARGLVSLPWEGLKLSDGEPAVPTTFVS GT:EXON 1|1-438:0| BL:SWS:NREP 1 BL:SWS:REP 13->434|PNCB_MYCTU|e-125|66.3|419/448| SEG 24->33|aaaladgsaa| SEG 138->151|saiasaaarmvsaa| SEG 167->183|aaapaaaraaylagfda| BL:PDB:NREP 1 BL:PDB:REP 10->418|2f7fA|5e-44|33.3|402/482| RP:PDB:NREP 1 RP:PDB:REP 10->415|3dhfA|2e-53|16.5|389/464| RP:PFM:NREP 1 RP:PFM:REP 156->360|PF04095|9e-26|42.7|199/227|NAPRTase| HM:PFM:NREP 1 HM:PFM:REP 156->349|PF04095|6.7e-15|25.7|191/245|NAPRTase| RP:SCP:NREP 2 RP:SCP:REP 10->136|2f7fA2|2e-30|27.6|127/137|d.41.2.1| RP:SCP:REP 153->415|1ytdA1|1e-56|26.5|249/270|c.1.17.1| HM:SCP:REP 5->139|2f7fA2|7.1e-35|43.0|135/0|d.41.2.1|1/1|Nicotinate/Quinolinate PRTase N-terminal domain-like| HM:SCP:REP 140->435|2f7fA1|6.8e-99|44.5|290/0|c.1.17.1|1/1|Nicotinate/Quinolinate PRTase C-terminal domain-like| OP:NHOMO 563 OP:NHOMOORG 469 OP:PATTERN 1111111111111111111111111-111111-----------1--11-----11111111-111--- --11111111111111122-21--112222211111111111111111111111211111221111212111111111111111-111---------------1---11---------------------------111-----11111111-11--------1-1-1111------------1111111-1-11111111111111111-1111111111211111111112111111111111111111111111221212122222212111111111111111111111111111111111111111111111111111-11211111111111111111111111111---111-1--1-1111111-------1-----------------------------------------------------------------------------1-----------------------------------------------1----------11--111111---------11---------1--------------------1----1-------------111-1111-111111-1----1111111------------1----------1------------------------11111---------------------------------------------------------------------------------------------1111111111-------1-1-------------------1----------------------------------------------------------1-------11111111111-----------------------------------12- 11--111-1--1--------------------------------------------------------------------------------------------------212111---1-11111---6G1-1-3111--111-----11--21211-1291111-612313111--1F111--1242-221111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 409 STR:RPRED 93.4 SQ:SECSTR #########cGGGcccGGGGGGGGTccTHHHcccHTEEEEEEEEEEccccEEEcccHHHHHHHTccccccHHHHHHHHHHHHTccHHHHHTTcccEEEEEccTTcEEETTcccEEEEEccGGGTTHHHHTHHHHHHHHHHHHHHHHcccTTGGGcEEEccTTTcccHHHHHHHHHHHTTTccccccTHHHHHccccccccccccHHHHHTTcGGGGHHHHHHHHHHHTcccEEEEcccccHHTcccccTHHHTTccEEEEcccccHHHHHHHHHHHHHHHccTTEEEEEcccccHHHHHHHHHHGGEEEEEcHHHHTcccTTTTTEEEEEEEETTEEEEcccGGGcccccccEEEEcTTccEEEEcTTGGGGccccccGccEEEEEccEEEEETTEEccccccHHHHHHHTccccHHc#################### DISOP:02AL 1-2| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccEEEHHHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHcccccEEEEEEEccEEEccccEEEEEEccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHcccccccHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHcccEEEEEcHHHccccccccccEEEEEEEEcccccccccccccccccccEEEEEEccccEEEEEEEEEccccccccccccHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHccHHHHHccccccccccEEcc //