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Nocardia farcinica IFM 10152 (nfar0)
Gene : pntAa
DDBJ      :pntAa        putative pyridine nucleotide transhydrogenase alpha 1 subunit
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  596/915 : Eukaryota  134/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.23.12
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->368 1x14A PDBj 3e-69 45.7 %
:RPS:PDB   16->157 2eezA PDBj 6e-18 32.9 %
:RPS:PDB   204->342 2dvmA PDBj 3e-11 18.2 %
:RPS:SCOP  16->173 1f8gA2  c.23.12.2 * 5e-42 39.9 %
:RPS:SCOP  196->325 1pjbA1  c.2.1.4 * 1e-23 33.0 %
:HMM:SCOP  15->179 1pjcA2 c.23.12.2 * 4.3e-50 45.6 %
:HMM:SCOP  148->326 1pjcA1 c.2.1.4 * 5.3e-40 41.6 %
:RPS:PFM   18->148 PF05222 * AlaDh_PNT_N 4e-23 51.9 %
:RPS:PFM   164->306 PF01262 * AlaDh_PNT_C 7e-24 47.2 %
:HMM:PFM   158->318 PF01262 * AlaDh_PNT_C 4.2e-53 42.2 161/168  
:HMM:PFM   18->148 PF05222 * AlaDh_PNT_N 2.9e-44 53.4 131/136  
:BLT:SWISS 17->369 PNTA_HAEIN 4e-69 45.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55858.1 GT:GENE pntAa GT:PRODUCT putative pyridine nucleotide transhydrogenase alpha 1 subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1116051..1117169 GB:FROM 1116051 GB:TO 1117169 GB:DIRECTION + GB:GENE pntAa GB:PRODUCT putative pyridine nucleotide transhydrogenase alpha 1 subunit GB:PROTEIN_ID BAD55858.1 LENGTH 372 SQ:AASEQ METTQNVGDSSPRGARVGVVRETNAGERRVALVPKIIPALLKQGVEVVVESGAGHGALIPDQAYVEAGAVIGDPWSADVVVKVAPPSDAEVAKLSKGQTLIGFLAPRNAENQIQALKSAGVQAFAVEAIPRISRAQVMDALSSQANVAGYKAVLLAASESTRFFPMLTTAAGTVKPATVLVLGVGVAGLQALATAKRLGGRTTGYDVRPEVADQVRSVGAQWLDLGIDAAGEGGYARELTDEEKAKQQQALEDAIKGFDVVITTALVPGRPAPRLVTAAAVEGMKPGSVIVDLAGETGGNCELTEPGKTVVKHDVTIASPLNLPATMPEHASELYSKNIAALLELMLVDGALAPDFSDQVLADSCVTREVDA GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 17->369|PNTA_HAEIN|4e-69|45.9|353/512| SEG 177->195|atvlvlgvgvaglqalata| BL:PDB:NREP 1 BL:PDB:REP 16->368|1x14A|3e-69|45.7|348/366| RP:PDB:NREP 2 RP:PDB:REP 16->157|2eezA|6e-18|32.9|140/343| RP:PDB:REP 204->342|2dvmA|3e-11|18.2|132/438| RP:PFM:NREP 2 RP:PFM:REP 18->148|PF05222|4e-23|51.9|131/136|AlaDh_PNT_N| RP:PFM:REP 164->306|PF01262|7e-24|47.2|142/164|AlaDh_PNT_C| HM:PFM:NREP 2 HM:PFM:REP 158->318|PF01262|4.2e-53|42.2|161/168|AlaDh_PNT_C| HM:PFM:REP 18->148|PF05222|2.9e-44|53.4|131/136|AlaDh_PNT_N| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF05222|IPR007886| GO:PFM GO:0055114|"GO:oxidation reduction"|PF05222|IPR007886| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01262|IPR007698| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01262|IPR007698| RP:SCP:NREP 2 RP:SCP:REP 16->173|1f8gA2|5e-42|39.9|158/201|c.23.12.2| RP:SCP:REP 196->325|1pjbA1|1e-23|33.0|112/168|c.2.1.4| HM:SCP:REP 15->179|1pjcA2|4.3e-50|45.6|160/194|c.23.12.2|1/1|Formate/glycerate dehydrogenase catalytic domain-like| HM:SCP:REP 148->326|1pjcA1|5.3e-40|41.6|161/168|c.2.1.4|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 985 OP:NHOMOORG 736 OP:PATTERN -----------------------------1--------1111-1------------------------ -13221-------122222-222224212222222222422-1-11111112134111---12331222111111111---12------------1---1-21-111121---------------111121-112----------221222211111111211212122221121111111111-1331--111222222222222222122211223222-21-1111111212222222222222211111--1-11------------11--1----------1--------------------------1-----------------------------------1-1----11-11---1-111----1-11221-----2121111111111111111111-1-11111111112-211211421122112221111211121111111111111-121------------1111-111-1111----22212--111222222221111113211111231229431211211-111121211121-1-111111111222113--222---211111----1-111-221211-1-------------1----11-------111212111111111111111111111111---2112------111111-1111111111-1111111111111111111111111111111111111111111111111111-111111111111----22222222221122111111111111111111111111111111111111-1111-11----------11111111111111111-1--111------1-111111----------1-----------------1-----------------21- 1122111-1------11-1-111111111111111111111-11111111111111111111---------------------------1111111---1-------12-2252213111111162111252-1211111111211111111131112212412121-11-112--1218---2----11--322---2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 354 STR:RPRED 95.2 SQ:SECSTR ###############EEEEcccccTTcccccccHHHHHHHHHTTcEEEEETTTTGGGTccHHHHHHHTcEEHHHTTccEEEccccccGGGGGGccTTcEEEEcccGGGcHHHHHHHHHHTcEEEEGGGcccccTTcccTTTHHHHHHHHHHHHHHHHETTTHHHHHHHHHTcccTTcEEEEEcccHHHHHHHHHHHHTTcEEEHTTccGGGEEEEEEETTEEEEccTTccHHHHcHHHHTTccTTcccccHHHHHTTccEEEEcccccTccccccccHHHHTTccTTcEEEEccEEEcccccccHHHHHHHTccEEccccccccccccGGGTHHHHHHHHHHHHHHcccccccccTTcHHHHHHEEEET### DISOP:02AL 1-11, 370-372| PSIPRED cccccccccccccEEEEEEEEEEcccccEEcccHHHHHHHHHcccEEEEEccccccccccHHHHHHHccEEEEcccccEEEEcccccHHHHHHcccccEEEEEccccccHHHHHHHHHccccEEEEEccccccccccccEEcccHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEEcccccccEEccHHHHHccccccEEEEEEEcccccccccccccEEEEccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHccEEEccccc //