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Nocardia farcinica IFM 10152 (nfar0)
Gene : ppc
DDBJ      :ppc          putative phosphoenolpyruvate carboxylase
Swiss-Prot:CAPP_NOCFA   RecName: Full=Phosphoenolpyruvate carboxylase;         Short=PEPCase;         Short=PEPC;         EC=4.1.1.31;

Homologs  Archaea  5/68 : Bacteria  481/915 : Eukaryota  31/199 : Viruses  0/175   --->[See Alignment]
c.1.12
:923 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->923 1jqoA PDBj 2e-96 33.6 %
:RPS:PDB   458->684 2azoB PDBj 1e-14 14.6 %
:RPS:SCOP  15->923 1fiyA  c.1.12.3 * e-169 30.8 %
:HMM:SCOP  17->923 1jqoA_ c.1.12.3 * 4.6e-292 49.6 %
:RPS:PFM   452->923 PF00311 * PEPcase 4e-85 43.8 %
:HMM:PFM   531->897 PF00311 * PEPcase 9.7e-53 25.4 319/503  
:HMM:PFM   173->226 PF08664 * YcbB 0.00061 36.0 50/134  
:BLT:SWISS 1->923 CAPP_NOCFA 0.0 100.0 %
:PROS 576->588|PS00393|PEPCASE_2
:PROS 145->156|PS00781|PEPCASE_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56774.1 GT:GENE ppc GT:PRODUCT putative phosphoenolpyruvate carboxylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2103844..2106615 GB:FROM 2103844 GB:TO 2106615 GB:DIRECTION + GB:GENE ppc GB:PRODUCT putative phosphoenolpyruvate carboxylase GB:PROTEIN_ID BAD56774.1 LENGTH 923 SQ:AASEQ MTEPRIETEQDATRPLRDDIRFLGGVLGDTIRDHEGPEVFDLIERVRIEAFRVRREEVGRSAVAEMLRGVDIAVALPLIRAFSYFVLLANLAEDIQRDRRRAVHVAAGEPPQDSSLAATYRKLDAAALDAAAVADLLSDALVSPVITAHPTETRRRTVFDAQTRITELMRARQRATDPAERAALESRIRRQVLSLWRTALIRLARLRIQDEIAVGLRYYELTLFDVIPAINAEVRAALRARWPGADLLARPILRPGSWIGGDRDGNPYVTAEVVRHAATQAAGVALRRYLAELVELAKTLSLSARLVPVTPRVAELAAAGYPDPATHGDEPYRRALHHIRVRLSATADRVLDAPVPEAVAEPDAQPYAGPREFLDDLDAIDASLRASGDGLLADDRLAALRHAVETFGFHLQGLDMRQNSEVHEQVVAELLAWAGVHPAYGDLPEDARVELLAAELRTRRPLLGPHARLSEQAAKEVGIVRAAKQVVDTFGPEAVPNYIISMCTSVSDMLEAALLLKEGGLLDPGAPEGSPSCTVNIVPLFETIEDLGAGAATLAAALEVPVYRELVAAAGMRQEVMLGYSDSNKDGGYLAANWALYRAELDLVEVARKTGIRLRLFHGRGGTVGRGGGRSYDAILAQPAGAVRGALRLTEQGEVIAAKYAEPGAAHRNLESLIAGTLESTLLDVEGLGADAEPAYELMDELAALARAAYARLVHETPGFVEYFRQSTPVAEVGDLNIGSRPASRKPTNSVSDLRAIPWVMAWSQARVMLPGWYGTGAALEEWVGGDPGRLARLTDLYRRWPFFRTVLSNLAQVMAKSDLDIAARYAELVDDAALRDQIFGMIREEHARTLRMHAAITGHDQLLADNRSLAESIHNRFPYLEPLNQMQVELLRRLRSGDDSELVKRGILLTMNGLATALRNSG GT:EXON 1|1-923:0| SW:ID CAPP_NOCFA SW:DE RecName: Full=Phosphoenolpyruvate carboxylase; Short=PEPCase; Short=PEPC; EC=4.1.1.31; SW:GN Name=ppc; OrderedLocusNames=NFA_19280; SW:KW Carbon dioxide fixation; Complete proteome; Lyase;Tricarboxylic acid cycle. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->923|CAPP_NOCFA|0.0|100.0|923/923| GO:SWS:NREP 3 GO:SWS GO:0015977|"GO:carbon fixation"|Carbon dioxide fixation| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0006099|"GO:tricarboxylic acid cycle"|Tricarboxylic acid cycle| PROS 576->588|PS00393|PEPCASE_2|PDOC00330| PROS 145->156|PS00781|PEPCASE_1|PDOC00330| SEG 123->143|ldaaaldaaavadllsdalvs| SEG 199->208|alirlarlri| SEG 352->366|dapvpeavaepdaqp| SEG 388->401|gdglladdrlaalr| SEG 510->522|leaalllkeggll| SEG 547->558|lgagaatlaaal| SEG 619->630|grggtvgrgggr| SEG 702->713|laalaraayarl| BL:PDB:NREP 1 BL:PDB:REP 31->923|1jqoA|2e-96|33.6|844/904| RP:PDB:NREP 1 RP:PDB:REP 458->684|2azoB|1e-14|14.6|205/227| RP:PFM:NREP 1 RP:PFM:REP 452->923|PF00311|4e-85|43.8|443/489|PEPcase| HM:PFM:NREP 2 HM:PFM:REP 531->897|PF00311|9.7e-53|25.4|319/503|PEPcase| HM:PFM:REP 173->226|PF08664|0.00061|36.0|50/134|YcbB| GO:PFM:NREP 2 GO:PFM GO:0006099|"GO:tricarboxylic acid cycle"|PF00311|IPR001449| GO:PFM GO:0008964|"GO:phosphoenolpyruvate carboxylase activity"|PF00311|IPR001449| RP:SCP:NREP 1 RP:SCP:REP 15->923|1fiyA|e-169|30.8|861/874|c.1.12.3| HM:SCP:REP 17->923|1jqoA_|4.6e-292|49.6|885/0|c.1.12.3|1/1|Phosphoenolpyruvate/pyruvate domain| OP:NHOMO 593 OP:NHOMOORG 517 OP:PATTERN ------------------------1--1111------------------------------------- 11-111111111---11----11111-----11111111111-1111--11-111-----11-----111111111111-1------------------1-1-1111111---------------11-111-111-22222---21111111111111111111111111111111111111111111---1----------------------------------------1---------------------1-1--1-112---------------11111111111111111111111111111111111111111111-------------------------------------------------11-11112-----1211111111111------------11111111---------1------11----------1-1------------1-1------------------------------1--111111111111111111111121111111111111--111121111111111111--11111111111111111-1------------111-1---1----11--------------1--------1---11111111--1111111111111111111111---1111------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111---------1111-1111111-11-11111111111111111111111111111111111111--------1111111111111111111111111---------1---------------------------------1----------------1-- 111111--1-----1--------------------------------------------------------------------------------------------12------------------------------------------------------1-----------1321L1112285D8-54221---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 900 STR:RPRED 97.5 SQ:SECSTR ###############HHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccTHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT##cTTcT#HcccHHHHHHHHHTTccccHHHHHHHHHTcEEEEEEccTTccccHHHHHHHHHHHHHHHTTcTTccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHTTTccccccTTccEEEEEcTTTccTTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccTTccccHHHHHHHHHHHHHHHHHTcccTTTTTHHHHHHHHHHHHTTcccEEEEEccHHHHHHHHHHHHHHHTcccccTTccHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHTTTccccccccccccHHHHHHTTcccccccccEETTTTEEEEEEEEcTTccccccccEEEEEcccccccccccTTcTTTTTTTcEEEEEEEccTTccGGGccccEcccHHHHHHHHHHHHHHHHHHHTTccHHTTTTTccccccccccGGGTcccHHHHcEEEEEccccTTccEEEEcTTccEEEEccHEEEEEcHHHHHHHHHHHHTTcHHHcccccccHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHcccGGGGGGccccccc#####cccTTcccHHHHHHHHHTTccHHHHTTHHHHHHHHHHHcTTHHHHHHHHHHHcHHHHHHHHHHHHHHTTccHHHHHHHHHHTcccTTHHHHHHHHHHHHHHHHHHHHHHHTcccTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccTTTTTcHHHHHHHHHHHHTccc DISOP:02AL 1-3, 6-10, 50-65, 101-113, 316-324, 685-689, 738-754, 899-900| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHcHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHcccccEEEHHHccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHcccccccccccHHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHcHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHcccHHHcccEEEEEcHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccc //