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Nocardia farcinica IFM 10152 (nfar0)
Gene : purK
DDBJ      :purK         putative phosphoribosylaminoimidazole carboxylase ATPase subunit
Swiss-Prot:             

Homologs  Archaea  41/68 : Bacteria  712/915 : Eukaryota  121/199 : Viruses  0/175   --->[See Alignment]
b.84.2c.30.1d.142.1
:406 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->378 3ethA PDBj 3e-31 32.7 %
:RPS:PDB   35->288 3d2oA PDBj 4e-33 9.6 %
:RPS:SCOP  116->378 1a9xA5  d.142.1.2 * 4e-20 17.5 %
:HMM:SCOP  19->115 1eyzA2 c.30.1.1 * 1e-22 42.3 %
:HMM:SCOP  116->319 1b6rA3 d.142.1.2 * 5.9e-57 42.4 %
:HMM:SCOP  321->408 1b6rA1 b.84.2.1 * 3.9e-17 37.2 %
:RPS:PFM   126->295 PF02222 * ATP-grasp 5e-25 40.7 %
:HMM:PFM   125->297 PF02222 * ATP-grasp 4.2e-54 46.5 170/172  
:BLT:SWISS 18->405 PURK_MYCTU e-127 59.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55845.1 GT:GENE purK GT:PRODUCT putative phosphoribosylaminoimidazole carboxylase ATPase subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1106155..1107375 GB:FROM 1106155 GB:TO 1107375 GB:DIRECTION + GB:GENE purK GB:PRODUCT putative phosphoribosylaminoimidazole carboxylase ATPase subunit GB:PROTEIN_ID BAD55845.1 LENGTH 406 SQ:AASEQ MTRLHDVSTRSFDPATMPTVTMIGGGQLARMTHQAAIALGQRLRVLAEKVDDPAAQVSPEVVLGSHTDLAALRKAAVGSHALTFDHEHVPTEHLEVLVAEGVNVAPPPTALVYAQDKLAMRTRLAELGLPVPAFTAVTAPAEAIAFGDEHGWPFVLKAVRGGYDGRGVWMPADATEAERLVTDQLARGTRLLAEAKVDLRRELSAMVARSPFGQAATWPVVETVQRNGQCAVVIAPAPDLPDEIATAAETMALNLARELGVVGVMAVELFETHAGELLVNELAMRPHNSGHWGMDGARTGQFEQHLRAVLDYPLGDTAPLAPVTVMANILGAPEAPAMSMDERLHHLFARMPEAKVHLYGKGERPDRKIGHVNVLGDDVAVVREKAERAAHWMSHAVWTDGWDPHE GT:EXON 1|1-406:0| BL:SWS:NREP 1 BL:SWS:REP 18->405|PURK_MYCTU|e-127|59.0|388/429| SEG 131->146|vpaftavtapaeaiaf| SEG 379->390|vavvrekaeraa| BL:PDB:NREP 1 BL:PDB:REP 17->378|3ethA|3e-31|32.7|324/355| RP:PDB:NREP 1 RP:PDB:REP 35->288|3d2oA|4e-33|9.6|230/244| RP:PFM:NREP 1 RP:PFM:REP 126->295|PF02222|5e-25|40.7|167/171|ATP-grasp| HM:PFM:NREP 1 HM:PFM:REP 125->297|PF02222|4.2e-54|46.5|170/172|ATP-grasp| RP:SCP:NREP 1 RP:SCP:REP 116->378|1a9xA5|4e-20|17.5|252/275|d.142.1.2| HM:SCP:REP 19->115|1eyzA2|1e-22|42.3|97/111|c.30.1.1|1/1|PreATP-grasp domain| HM:SCP:REP 116->319|1b6rA3|5.9e-57|42.4|198/198|d.142.1.2|1/1|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 321->408|1b6rA1|3.9e-17|37.2|78/79|b.84.2.1|1/1|Rudiment single hybrid motif| OP:NHOMO 1018 OP:NHOMOORG 874 OP:PATTERN ---1--2211111111-211111-11112111---11111111------------1--1-1111--11 1-11111222222231111-121113111111222212221---1111111111111111111111111112222222----112-221111-------11221111111---------------11-111---1111111---11211211111111222222211111111211111111111111---1121111111111111111111121111111111111111121111111111111111111121112212-1-22112222111111111111111111111111111111111111111111111111111111-------------------------1---1-------1--11-1---1-1111211111111111111111111111111111-11111111111111111111111111111111111111111111111111111211111111111---------------111112121111111111111111112221111111111222211111211111121211112111121111111111111------11-11111-11111-11111-111----------------------1----22222121111111111111-222211--1111-1-112------11111111111111111-111111111111111111-1111111111111111111111111111111111111111111111--12-----111122111222221111111112111111111111221221212221211112222222222111122222221222222122222111111--111111------------------------------------1----1-1111-- ----111-----1111111111111111111211111111111111111111111111111111111111111111111111111111-1111111111111111--12------------------------------------------------------1------------11181111121121121111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 93.1 SQ:SECSTR cccccccccccTTcccccEEEEcccHHHHHHHcccEEEEEEEEEEEEEEEEETEEEEEEEEEEEEEEEcTTccccHHHHHHHHHccccccHHHHHHHHHHHHHHTTccEEEEEEEEEEEEEEEcTTTccEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEcHHHHHHccccccEEEEEHHHHHHHccEEEEEEEEEcccccHHHHHHHHHTTccEEccccccHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHcTTEEEEEEEEEEETTTEEEEEccTTccccTHHHHHHHHTccHHHHHHHHHTTccTTcTTTccccTTTcccccETTTTTEEccEEcccTTEEEEEccccTTcEEcccccEEEEEEEEEcc############################ DISOP:02AL 1-19, 400-406| PSIPRED ccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccccccHHHHccEEEEEccccHHHHHHHHHHccEEEEccccccHHHHHHHHHcccEEcccHHHHHHHHcHHHHHHHHHHccccccccEEEccHHHHHHHHHHccccEEEEEccccccccccEEEccHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEEEccccEEEEEccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccEEEEEEcccccccccEEEEEccccHHHHHHHHHHccccccHHHHccccEEEEEEccccccccccccHHHHHHHHccccEEEEcccccccccEEEEEEEEEccHHHHHHHHHHHHHHHHHccccccccccc //