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Nocardia farcinica IFM 10152 (nfar0)
Gene : pyrD
DDBJ      :pyrD         putative dihydroorotate dehydrogenase
Swiss-Prot:PYRD_NOCFA   RecName: Full=Dihydroorotate dehydrogenase;         EC=1.3.5.2;AltName: Full=Dihydroorotate oxidase;AltName: Full=DHOdehase;         Short=DHODase;         Short=DHOD;

Homologs  Archaea  21/68 : Bacteria  662/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:369 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->360 2prlA PDBj 5e-66 44.5 %
:RPS:PDB   2->360 1d3hA PDBj 5e-41 41.4 %
:RPS:SCOP  52->348 1gt8A2  c.1.4.1 * 6e-63 26.1 %
:HMM:SCOP  1->361 1uumA_ c.1.4.1 * 3e-99 42.2 %
:RPS:PFM   53->342 PF01180 * DHO_dh 7e-48 44.9 %
:HMM:PFM   49->343 PF01180 * DHO_dh 2.7e-92 45.3 289/293  
:BLT:SWISS 1->369 PYRD_NOCFA 0.0 100.0 %
:PROS 84->103|PS00911|DHODEHASE_1
:PROS 295->315|PS00912|DHODEHASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57763.1 GT:GENE pyrD GT:PRODUCT putative dihydroorotate dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3099486..3100595) GB:FROM 3099486 GB:TO 3100595 GB:DIRECTION - GB:GENE pyrD GB:PRODUCT putative dihydroorotate dehydrogenase GB:PROTEIN_ID BAD57763.1 LENGTH 369 SQ:AASEQ MYALLLRVMFLVPPERIHHLAFAAMRVAARFAPTRALVRRLAVVDDPILHSTVFGVPFRAPLGLAAGFDKNAEGVDVWGPFGWGFAEIGTVTAQAQPGNPAPRLFRLPADRALINRMGFNNHGAARAAEQLRARTATVPIGANIGKTKVVEPAGAAADYATSAALLGPLADFVVVNVSSPNTPGLRDLQAVESLRPLLRTVLETVADGGRRVPVLVKIAPDLSDEDIDAVADLAVELGLAGIVATNTTIRRDGLHTDPEDVAAMGAGGLSGAPVADRSLEVLRRLYRRVGDRLALISVGGIETPEQAYQRVLAGASLLQGYTGFIYGGPFWTRKIHRGLAELLRRDGYTSLTEAVGAEHRGPRPQADTA GT:EXON 1|1-369:0| SW:ID PYRD_NOCFA SW:DE RecName: Full=Dihydroorotate dehydrogenase; EC=1.3.5.2;AltName: Full=Dihydroorotate oxidase;AltName: Full=DHOdehase; Short=DHODase; Short=DHOD; SW:GN Name=pyrD; OrderedLocusNames=NFA_29160; SW:KW Cell membrane; Complete proteome; Flavoprotein; FMN; Membrane;Oxidoreductase; Pyrimidine biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->369|PYRD_NOCFA|0.0|100.0|369/369| GO:SWS:NREP 5 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0006221|"GO:pyrimidine nucleotide biosynthetic process"|Pyrimidine biosynthesis| PROS 84->103|PS00911|DHODEHASE_1|PDOC00708| PROS 295->315|PS00912|DHODEHASE_2|PDOC00708| SEG 21->32|afaamrvaarfa| SEG 153->164|agaaadyatsaa| BL:PDB:NREP 1 BL:PDB:REP 11->360|2prlA|5e-66|44.5|335/367| RP:PDB:NREP 1 RP:PDB:REP 2->360|1d3hA|5e-41|41.4|345/364| RP:PFM:NREP 1 RP:PFM:REP 53->342|PF01180|7e-48|44.9|285/290|DHO_dh| HM:PFM:NREP 1 HM:PFM:REP 49->343|PF01180|2.7e-92|45.3|289/293|DHO_dh| GO:PFM:NREP 3 GO:PFM GO:0004152|"GO:dihydroorotate dehydrogenase activity"|PF01180|IPR012135| GO:PFM GO:0006222|"GO:UMP biosynthetic process"|PF01180|IPR012135| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01180|IPR012135| RP:SCP:NREP 1 RP:SCP:REP 52->348|1gt8A2|6e-63|26.1|287/310|c.1.4.1| HM:SCP:REP 1->361|1uumA_|3e-99|42.2|348/0|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 932 OP:NHOMOORG 865 OP:PATTERN 11---1------------------11111111111--1-----------1----1-111-1------- --1-111111121211111-11111111111111111111----1111111111111111111-11-11111111111-----11111111--------11111111111--------------------------11111---11111111111111111111111111111111111111111111---1111111111111111111-1111111111----------11-11111111111111-1111-1-1--11---------1--------111-11111111111111111------------111222222211---------1----1---------------1-1111---1-----------1111111111111111111112111111111111-11111111111111111111111111111111111111111111111111111111111111111---------------111111111-111111111111111111111111111111111111111111111111111111111111111111111111---------------1------1111111--1111111111111111111111111111111111111111111111111111111111-1-11-1--11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111--111111111111111111111111112111----------1111111111111111111111111111---1111111--------1-------------------------------------111 11----1-1-1-1111111111111111111111111111111111-11111111111111111111111111111111121111111-11111111111111-11-1112231111111111134111281-212-1111-132112121-1111111133121112118112111-1E1111121-21111121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 363 STR:RPRED 98.4 SQ:SECSTR #HTHHHHHHHHccHHHHHHHHHHHHHTcTTc#EEHHHTTcccccccGGGcEEETTEEEcccEEEcTTccTTcccHHHHHHTTccEEEEEEEccccccccccccEEEEGGGTEEEEccccccccHHHHHHHHHTTHHHHHHHHHTTccEEEEcccHHHHHHHHHHHHGGGccEEEEEcccTTcTTGGGGGcHHHHHHHHHHHHHHHHcGGGccEEEEEEcccccHHHHHHHHHHHHHHTccEEEEcccccccHHHcTTcccTTTTcccEEEEGGGHHHHHHHHHHHHHHTTTcccEEEEcccccHHHHHHHHHHTccEEEEcHHHHHHcTHHHHHHHHHHHHHHHHTTcccHHHHTTGGGGTcTcE#### DISOP:02AL 365-369| PSIPRED cHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccHHHHHHcccccccEEEEEccccccccEEEcccccccHHHHHHHHHccccEEEEEcccccccccccccEEEEEEccccEEEEEccccccHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEcccccHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHcc //