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Nocardia farcinica IFM 10152 (nfar0)
Gene : radC
DDBJ      :radC         putative DNA repair protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.60.2
:230 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->218 2qlcE PDBj 5e-06 21.5 %
:HMM:SCOP  18->97 2a1jB1 a.60.2.5 * 1.9e-09 32.1 %
:HMM:PFM   106->218 PF04002 * DUF2466 1.4e-31 34.5 113/123  
:BLT:SWISS 7->213 RADC_VIBCM 7e-09 20.3 %
:PROS 176->181|PS01302|UPF0758
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55788.1 GT:GENE radC GT:PRODUCT putative DNA repair protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1045585..1046277 GB:FROM 1045585 GB:TO 1046277 GB:DIRECTION + GB:GENE radC GB:PRODUCT putative DNA repair protein GB:PROTEIN_ID BAD55788.1 LENGTH 230 SQ:AASEQ MGMSVPIARMPSSQRPRERLLTLGPMALSDGELLALLLGQGRRGASALELAAELLADHGGIAGLAAARPEELARRTGVGSAKAAALIAAFHLGHRARAESAAAPRLTHAAEVARVAAPLFAGARVERLLVLICDTQHRLRRHVFVAEGAVDRVAVPVREILNTVLRHDGRSFAVVHNHPSGDPHPSPDDRRATTLLHAAATTVGLRFLDHIVLAGEHWSRAAPLDDGFVE GT:EXON 1|1-230:0| BL:SWS:NREP 1 BL:SWS:REP 7->213|RADC_VIBCM|7e-09|20.3|207/224| PROS 176->181|PS01302|UPF0758|PDOC01006| SEG 27->56|alsdgellalllgqgrrgasalelaaella| SEG 62->75|aglaaarpeelarr| SEG 81->89|akaaaliaa| SEG 178->189|hpsgdphpspdd| SEG 192->202|attllhaaatt| BL:PDB:NREP 1 BL:PDB:REP 126->218|2qlcE|5e-06|21.5|93/124| HM:PFM:NREP 1 HM:PFM:REP 106->218|PF04002|1.4e-31|34.5|113/123|DUF2466| HM:SCP:REP 18->97|2a1jB1|1.9e-09|32.1|78/0|a.60.2.5|1/1|RuvA domain 2-like| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 93 STR:RPRED 40.4 SQ:SECSTR #############################################################################################################################cEEEEEEEcTTccEEEEEEEEcccccGGGccHHHHHHHHHHTTccEEEEEEEcTTccccccHHHHHHHHHHHHHHHHHTcEEEEEEEEccccE############ DISOP:02AL 1-3, 180-189| PSIPRED ccccccHHHcccccccHHHHHHHcHHcccHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEccccEEEEcHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEEEEEEccccccc //