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Nocardia farcinica IFM 10152 (nfar0)
Gene : recN
DDBJ      :recN         putative DNA repair protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  817/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:588 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   19->58 3czpB PDBj 6e-04 16.2 %
:RPS:PDB   459->544 1e69A PDBj 1e-11 30.2 %
:RPS:SCOP  12->199 1w44A  c.37.1.11 * 1e-11 13.3 %
:RPS:SCOP  459->544 1e69A  c.37.1.12 * 2e-12 30.2 %
:HMM:SCOP  1->226 1w44A_ c.37.1.11 * 2.7e-56 35.3 %
:HMM:SCOP  459->534 1sgwA_ c.37.1.12 * 1.2e-05 29.2 %
:RPS:PFM   459->527 PF02463 * SMC_N 2e-04 34.8 %
:HMM:PFM   14->536 PF02463 * SMC_N 6.5e-18 21.8 197/220  
:BLT:SWISS 1->570 RECN_MYCTU e-144 52.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56844.1 GT:GENE recN GT:PRODUCT putative DNA repair protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2173971..2175737 GB:FROM 2173971 GB:TO 2175737 GB:DIRECTION + GB:GENE recN GB:PRODUCT putative DNA repair protein GB:PROTEIN_ID BAD56844.1 LENGTH 588 SQ:AASEQ MLTEIRIDSLGVISAATAQFHEGFTVLTGETGAGKTMVVTSLHLLGGARADAGRVRLGANKAVVEGRFTVEDLNEDARGQVAEVLESAAAEADDDGSVIAIRTVSSDGRSRAHLGGRSVPASVLADFTSSLLTVHGQNDQLRLQKPEQQLAALDRFAADTVGPLLRKYQVLRRAWLDARTELLERTARSRELALEADRLKHSLDEIDAVAPEPGEDVRIVDEVRRLSDLDSLREAAAVAHDALAGPADAPEDGSGALDLLGAARARLEAAEDPALSALAPRLGEAIAVVVDLTTELSGYLSDLPSDPGALDSLLTRQAELKSLTRKYAPDIDGVLAWAAEARTRLGSLDVSEEALTKLAAEVDIAAERVRAAAVKLTAARTKAAGKLAAAVSAELAGLAMGKAKLEVQVRAVPAAAQDSAPLTVDGVELHAGATGVDEVEFRLAAHSGAQSLPLSKSASGGELSRVMLALEVVLAGSDHGATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDKSDEGGTVNSGVRALTKDERVVELARMLAGLDDTETGRAHAEELLEMARAERASV GT:EXON 1|1-588:0| BL:SWS:NREP 1 BL:SWS:REP 1->570|RECN_MYCTU|e-144|52.7|566/587| SEG 81->98|vaevlesaaaeadddgsv| SEG 255->275|galdllgaararleaaedpal| SEG 376->399|ltaartkaagklaaavsaelagla| SEG 571->586|rahaeellemaraera| RP:PDB:NREP 2 RP:PDB:REP 19->58|3czpB|6e-04|16.2|37/452| RP:PDB:REP 459->544|1e69A|1e-11|30.2|86/263| RP:PFM:NREP 1 RP:PFM:REP 459->527|PF02463|2e-04|34.8|69/536|SMC_N| HM:PFM:NREP 1 HM:PFM:REP 14->536|PF02463|6.5e-18|21.8|197/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 2 RP:SCP:REP 12->199|1w44A|1e-11|13.3|188/304|c.37.1.11| RP:SCP:REP 459->544|1e69A|2e-12|30.2|86/263|c.37.1.12| HM:SCP:REP 1->226|1w44A_|2.7e-56|35.3|207/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 459->534|1sgwA_|1.2e-05|29.2|72/200|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 831 OP:NHOMOORG 826 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111-111111111111111111111111111111111111111111111111111111111-11111111-111---11111111111--------------11111111111111111111111111111111111111111-111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111------------1111111111111-----11111111111111111111111111111111111111211111111111111111111111111111111111111111-11111111111111111111111111111-1111111-1-11111111--1111111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111111111111111111-11111111111111111111111111111111111111111111111111111111211111111111111--11111111-----1-1111-------------------------11111-1---111 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------111111--------12---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 171 STR:RPRED 29.1 SQ:SECSTR ##################GGGcEEEEEEEcTTccHH###HHHHHHHTTcGGGcEEEEc#####################################################################################################################################################################################################################################################################################################################################################################################HHHHHHHHHHHTcHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHTTTccccEEEEEcccccccHHHHHHHHHHHHHHTTTcEEEEEcccTTGGGGccEEEEEEEccccEEEEEcHHHHHHHTccHEEHHHHHHHc####################### DISOP:02AL 183-193, 265-272, 447-462, 582-588| PSIPRED cccEEEEEEEEEEEEEEEEEcccEEEEEccccccHHHHHHHHHHHHcccccHHHHHccccEEEEEEEEEEcccccHHHHHHHHHHHHcccccccccEEEEEEEEEccccEEEEEccEEEcHHHHHHHHHHHHHHHcccHHHHHccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccccccccccEEEEEEEccccccHHHHHHHHccHHHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHHHHccEEEEEEcHHHHHHccccEEEEEEEEcccEEEEEEEEccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccc //