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Nocardia farcinica IFM 10152 (nfar0)
Gene : rfbA
DDBJ      :rfbA         putative glucose-1-phosphate thymidyltransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  719/915 : Eukaryota  87/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:290 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->280 1h5sD PDBj e-105 64.5 %
:RPS:PDB   1->231 2e3dC PDBj 2e-57 27.5 %
:RPS:SCOP  1->285 1fxoA  c.68.1.6 * 7e-90 60.7 %
:HMM:SCOP  1->286 1h5rA_ c.68.1.6 * 3.8e-83 45.5 %
:RPS:PFM   4->228 PF00483 * NTP_transferase 2e-35 43.2 %
:HMM:PFM   3->235 PF00483 * NTP_transferase 1.3e-66 35.6 233/248  
:BLT:SWISS 2->285 RMLA3_ECOLX e-105 64.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55049.1 GT:GENE rfbA GT:PRODUCT putative glucose-1-phosphate thymidyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(216499..217371) GB:FROM 216499 GB:TO 217371 GB:DIRECTION - GB:GENE rfbA GB:PRODUCT putative glucose-1-phosphate thymidyltransferase GB:PROTEIN_ID BAD55049.1 LENGTH 290 SQ:AASEQ MRGIILAGGTGSRLHPITRGVSKQLVPVYDKPMIYYPLSTLMLAGIRDVLVITTPEDAQAFRRLLGDGSQFGIAISYVVQPEPDGLARAFVLGADHIGSDCAALVLGDNIFHGPGLGTSLERFDGISGGAVFAYWVSDPTAYGVVEFAEGKAISIEEKPKVPRSNYAIPGLYFYDNDVVEIARGLRPSARGEYEITDINRAYLEQGRLQVEVLARGTAWLDTGTFDSLLDAANYVRTIEERQGLKIGVPEEVAWRMGFIDDEGLRAVAEPLVRSGYGSYLLDLLERGRDW GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 2->285|RMLA3_ECOLX|e-105|64.4|284/293| BL:PDB:NREP 1 BL:PDB:REP 2->280|1h5sD|e-105|64.5|279/290| RP:PDB:NREP 1 RP:PDB:REP 1->231|2e3dC|2e-57|27.5|229/288| RP:PFM:NREP 1 RP:PFM:REP 4->228|PF00483|2e-35|43.2|222/238|NTP_transferase| HM:PFM:NREP 1 HM:PFM:REP 3->235|PF00483|1.3e-66|35.6|233/248|NTP_transferase| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00483|IPR005835| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF00483|IPR005835| RP:SCP:NREP 1 RP:SCP:REP 1->285|1fxoA|7e-90|60.7|285/292|c.68.1.6| HM:SCP:REP 1->286|1h5rA_|3.8e-83|45.5|286/290|c.68.1.6|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 1651 OP:NHOMOORG 872 OP:PATTERN 32213123455455543311113155543435232223232314445737545154433452231--2 2-33222222222322222-232222222222222223324434-111-2213321111131--22243521111-111121312-2254221111---21211122121--------------122222422233544463334232111222111211-1112291112-1-1--1-11-133211311-12222223323332233231122333211-412---1--241----------------1111112232221211114211-3211111111111222-11-11-11-1111111111111122311122223--2211112121123-11212-1-2--31-1222544-1-2212--1-111-1111-----111212111111-----------1-22232121232111121212222111112221212221-2222222223321311-------------------------------111-2----11212211111112211111113332311212212111211121221211131112222111143221213121112222211122313321-211221-1-----1--1111111111-11311321211221113444335122124111231---1211------23222344333443444-34433333433434444435332222132233323332333323444444221322222232222--1-11111111111211211211211111111--1---111-211111313122221211111111-1111311111111-11-122222222211111--12111111-----1--1-------------------2-------1-22321121211 --2211------121---1-------------------------------1--------1-1-1-1111-22-1-111111---------------1--1------11-221112--11-1-1-2112-342-111-1--11111-1------1---121111111-21241122-11-----1-2115-22--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 285 STR:RPRED 98.3 SQ:SECSTR cEEEEEcccccGGGTTGGGcccGGGcEETTEEHHHHHHHHHHHTTccEEEEEEcGGGHTTccHHHHHHHTcTcEEEEEEcTTcccHHHHHHTTHHHHccccEEEEcTTEEEcTTTHHHHHHHHHHHccEEEEEEEcccGGGcccEEcTEEEEcEEccccTTccccEEEEEEEEEcTTHHHHHHHccccGGGcccHHHHHHHHHHHccEEEEEcccccGEEETTcHHHHHHHHHHHHHHHTcTTTHHTTHHHHHHGGEEEcccHHHHHHGGGTTcHHHHHHHHHcT##### DISOP:02AL 287-290| PSIPRED cEEEEEcccccccccHHHHcccccEEEEcccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHccccEEEEEcccEEccccHHHHHHHHHHccccEEEEEEcccccccEEEEEcccEEEEEEEccccccccEEEEEEEEEcHHHHHHHHHccccccccccHHHHHHHHHHHcccEEEEEEEccEEEEcccHHHHHHHHHHHHHHHHHcccEEcccHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccc //