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Nocardia farcinica IFM 10152 (nfar0)
Gene : rpsI
DDBJ      :rpsI         putative ribosomal protein S9
Swiss-Prot:RS9_NOCFA    RecName: Full=30S ribosomal protein S9;

Homologs  Archaea  1/68 : Bacteria  904/915 : Eukaryota  126/199 : Viruses  0/175   --->[See Alignment]
d.14.1
:167 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->167 1vs5I PDBj 3e-26 44.6 %
:RPS:PDB   43->167 3bbnI PDBj 2e-37 46.4 %
:RPS:SCOP  43->167 1fjgI  d.14.1.1 * 7e-38 44.8 %
:HMM:SCOP  41->167 1fjgI_ d.14.1.1 * 1.9e-45 57.5 %
:RPS:PFM   47->167 PF00380 * Ribosomal_S9 7e-27 52.1 %
:HMM:PFM   47->167 PF00380 * Ribosomal_S9 6.4e-47 53.7 121/121  
:BLT:SWISS 1->167 RS9_NOCFA 4e-71 100.0 %
:PROS 106->124|PS00360|RIBOSOMAL_S9
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55712.1 GT:GENE rpsI GT:PRODUCT putative ribosomal protein S9 GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 967764..968267 GB:FROM 967764 GB:TO 968267 GB:DIRECTION + GB:GENE rpsI GB:PRODUCT putative ribosomal protein S9 GB:PROTEIN_ID BAD55712.1 LENGTH 167 SQ:AASEQ MTAPEEFNEDYTAEDAAVEVVEEDYGYEAEPATYAPVVIDRPVQTVGRRKEAVVRVRLVPGTGQFVLNGRSIEDYFPNKVHQQLVKSPLVTVERTESFDIHARLVGGGPSGQAGALRLAIARALIEVTPEDRPALKRAGFLTRDPRATERKKYGLKKARKAPQYSKR GT:EXON 1|1-167:0| SW:ID RS9_NOCFA SW:DE RecName: Full=30S ribosomal protein S9; SW:GN Name=rpsI; OrderedLocusNames=NFA_8670; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->167|RS9_NOCFA|4e-71|100.0|167/167| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| PROS 106->124|PS00360|RIBOSOMAL_S9|PDOC00311| SEG 9->30|edytaedaavevveedygyeae| SEG 115->125|alrlaiarali| BL:PDB:NREP 1 BL:PDB:REP 47->167|1vs5I|3e-26|44.6|121/127| RP:PDB:NREP 1 RP:PDB:REP 43->167|3bbnI|2e-37|46.4|125/127| RP:PFM:NREP 1 RP:PFM:REP 47->167|PF00380|7e-27|52.1|121/121|Ribosomal_S9| HM:PFM:NREP 1 HM:PFM:REP 47->167|PF00380|6.4e-47|53.7|121/121|Ribosomal_S9| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00380|IPR000754| GO:PFM GO:0005622|"GO:intracellular"|PF00380|IPR000754| GO:PFM GO:0005840|"GO:ribosome"|PF00380|IPR000754| GO:PFM GO:0006412|"GO:translation"|PF00380|IPR000754| RP:SCP:NREP 1 RP:SCP:REP 43->167|1fjgI|7e-38|44.8|125/127|d.14.1.1| HM:SCP:REP 41->167|1fjgI_|1.9e-45|57.5|127/127|d.14.1.1|1/1|Ribosomal protein S5 domain 2-like| OP:NHOMO 1051 OP:NHOMOORG 1031 OP:PATTERN ---------------------------------1---------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111-11111111-11-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111112111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111-1111111-11111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111-11111111111111111111111111111111 ----111--------111-111111111111-11111211111-1-1111111111111111111111-11-1-11111111111111--111---------1111-1-11---1111-----111-1-131-1111---------------------111-111-11-1---111--1611111224312211-1111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 125 STR:RPRED 74.9 SQ:SECSTR ##########################################cccccEETTEEEEEEEEEccccEEETTEEHHHHccccGGGTTTcHHHHTTTcTTTEEEEEEEEcccHHHHHHHHHHHHHHHTTTccGGGcHHHHTTTcccccccccccccTTcccTTcccccccc DISOP:02AL 19-34, 149-157| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHccEEEEEEEEEEEEEEEEEEEcccEEEEccccHHHHcccHHHHHHHHHHHHHHHccccEEEEEEEEcccEEHHHHHHHHHHHHHHHHHcHHHHHHHHHcccEEEcccccccccccccccccccccccc //