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Nocardia farcinica IFM 10152 (nfar0)
Gene : tauD
DDBJ      :tauD         putative taurine dioxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  211/915 : Eukaryota  84/199 : Viruses  0/175   --->[See Alignment]
b.82.2
:312 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->293 1gy9B PDBj 2e-50 40.2 %
:RPS:PDB   11->294 3eatX PDBj 9e-42 15.9 %
:RPS:SCOP  14->293 1gqwA  b.82.2.5 * 2e-60 40.8 %
:HMM:SCOP  13->294 1gy9A_ b.82.2.5 * 1.3e-79 40.6 %
:RPS:PFM   37->268 PF02668 * TauD 2e-28 37.7 %
:HMM:PFM   16->287 PF02668 * TauD 1.1e-54 35.4 243/255  
:BLT:SWISS 11->293 TAUD_ECOLI 5e-49 41.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56803.1 GT:GENE tauD GT:PRODUCT putative taurine dioxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2132485..2133423 GB:FROM 2132485 GB:TO 2133423 GB:DIRECTION + GB:GENE tauD GB:PRODUCT putative taurine dioxygenase GB:PROTEIN_ID BAD56803.1 LENGTH 312 SQ:AASEQ MTAVTENPVTTDTVHVAPVAGHIGADITGVDLREPLTDPQVEAITSALHTYKVLFFRDQHIGHAEHVAFSRRFGAVTPSHPYDDDAPTDYPEILAVDTRLYEKRFGVRKASYTNQWHTDVSPLINPPAASILRAEIAPERGGDTRWTNLVAAYEHLPESLRRFVDGLQAEHRFGGSRPAWSTDSDYAKKVAAAPLVTEHPVVRVHPVTGERALFVNPGFTTRIVGLTPAQSDAVLRLLFDHLADPAFTVSFRWRPGSIAFWDNRATAHLAPSDIDHLDVTRVLYRTTLEGDIPVGVDGRPSASVAGERFTGA GT:EXON 1|1-312:0| BL:SWS:NREP 1 BL:SWS:REP 11->293|TAUD_ECOLI|5e-49|41.3|271/283| BL:PDB:NREP 1 BL:PDB:REP 12->293|1gy9B|2e-50|40.2|271/275| RP:PDB:NREP 1 RP:PDB:REP 11->294|3eatX|9e-42|15.9|251/278| RP:PFM:NREP 1 RP:PFM:REP 37->268|PF02668|2e-28|37.7|220/258|TauD| HM:PFM:NREP 1 HM:PFM:REP 16->287|PF02668|1.1e-54|35.4|243/255|TauD| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02668|IPR003819| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02668|IPR003819| RP:SCP:NREP 1 RP:SCP:REP 14->293|1gqwA|2e-60|40.8|267/277|b.82.2.5| HM:SCP:REP 13->294|1gy9A_|1.3e-79|40.6|271/0|b.82.2.5|1/1|Clavaminate synthase-like| OP:NHOMO 815 OP:NHOMOORG 295 OP:PATTERN -------------------------------------------------------------------- ----3---------33311-12--1311111112222654-41F--------111--1------212422------------------------------------------------------------------------------------------------12-21-------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------3--2-----2-335---------------------------1-17-----11--21---112-----1---1-11111111-11-----------------------------------3271--433433444324442332377651331A6CA7--1111---14---31-1-----2-------------------------------------------3-----------------------------1--------1---------------------------------12---111111111111-1111111111111111111111--11-----------------11111111--111111111111---------------------------------11111-2---7-44344343-3433-234-------------------1-111--11111111--------------------------------------------------------------- --------------35363A795CBA911----1-1----------876664C55624433363512-25--52911111155543-2-6B4384264653-1452--6------------------------------------------------------1--------------1----12---15--1-43651 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 293 STR:RPRED 93.9 SQ:SECSTR ##########EEcccTTcccccccEEEEEccTTccGGGccHHHHHHHHHHHcEEEEccccccHHHHHHHHHHHccccccTTcccEEEEEcTTcccTTccTTccTTcTTTccccEEEEcTTTTccEEEEEEEEEEEEcccccccEEEEEHHHHHHHccHHHHHHHHHcEEEEEccGcccGGGccHcGGGcccccccEEEEEcEEEcTTTccEEEccccccccEEEcccTTTHHHHHHHHHHHHTcTTTEEEEcccTTcEEEEETTTEEEEEccccccccccEEEEEEEEEEEEEEcccccccTT######### DISOP:02AL 6-7| PSIPRED cccccccccccccEEEEEcccccccEEEcccccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHcccEEEEccccccccccccEEEEEccccccccccccccccccccccccccccccccEEEEEEEEccccccccEEEcHHHHHHHccHHHHHHHHccEEEEEEccHHHHHcccccccHHHHcccccEEccEEEEccccccEEEEEcccEEEEEccccHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEcccEEEcccccccccccccEEEEEEEEEcccccccccccccEEEccccccc //