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Nocardia farcinica IFM 10152 (nfar0)
Gene : tgt
DDBJ      :tgt          putative tRNA-guanine transglycosylase
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  828/915 : Eukaryota  159/199 : Viruses  0/175   --->[See Alignment]
c.1.20
:419 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->414 1ozmA PDBj 5e-79 43.6 %
:RPS:PDB   11->416 3bl3A PDBj e-117 43.5 %
:RPS:SCOP  13->410 1iq8A1  c.1.20.1 * 2e-99 27.6 %
:HMM:SCOP  13->415 1r5yA_ c.1.20.1 * 2.1e-126 46.7 %
:RPS:PFM   167->409 PF01702 * TGT 6e-64 50.9 %
:HMM:PFM   165->410 PF01702 * TGT 1.8e-87 48.1 233/238  
:BLT:SWISS 22->418 TGT_THETN 9e-92 48.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55107.1 GT:GENE tgt GT:PRODUCT putative tRNA-guanine transglycosylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 272952..274211 GB:FROM 272952 GB:TO 274211 GB:DIRECTION + GB:GENE tgt GB:PRODUCT putative tRNA-guanine transglycosylase GB:PROTEIN_ID BAD55107.1 LENGTH 419 SQ:AASEQ MRTVVAAETSSGFSFTVGTRLDGGRHGRTGVIRTPHGEIATPAFVPVGTKATVKAVLPETMRELGAQALLANAYHLYLQPGADIVDEAGGLGAFMNWPGPTFTDSGGFQVMSLGVGFKKVLAMESVGVANDDVIAAGKERLATVDDDGVTFRSHLDGSTHRFTPEVSMGIQHRLGADVMFAFDELTTLLNTRGYQEKSLQRTHEWAQRCIDEHERLTAARTHRPYQALFAVIQGAQYEDLRRKACRDLEAIRGAAGTAFDGYGIGGALEKHNLGTIVGWCSDELPEEKPRHMLGISEPEDLFVAVENGADTFDCVNPSRVARNAAIYRGDGRFNINTSRYRRDFTPIDEDCDCYTCANYTRAYLHHLFKAKEMLAATLCTIHNERFTVRLVDRIRASIDGGYFDEFKAETLGRWQGGRR GT:EXON 1|1-419:0| BL:SWS:NREP 1 BL:SWS:REP 22->418|TGT_THETN|9e-92|48.2|359/375| BL:PDB:NREP 1 BL:PDB:REP 13->414|1ozmA|5e-79|43.6|365/372| RP:PDB:NREP 1 RP:PDB:REP 11->416|3bl3A|e-117|43.5|363/367| RP:PFM:NREP 1 RP:PFM:REP 167->409|PF01702|6e-64|50.9|230/238|TGT| HM:PFM:NREP 1 HM:PFM:REP 165->410|PF01702|1.8e-87|48.1|233/238|TGT| GO:PFM:NREP 3 GO:PFM GO:0006400|"GO:tRNA modification"|PF01702|IPR002616| GO:PFM GO:0008479|"GO:queuine tRNA-ribosyltransferase activity"|PF01702|IPR002616| GO:PFM GO:0008616|"GO:queuosine biosynthetic process"|PF01702|IPR002616| RP:SCP:NREP 1 RP:SCP:REP 13->410|1iq8A1|2e-99|27.6|322/355|c.1.20.1| HM:SCP:REP 13->415|1r5yA_|2.1e-126|46.7|366/0|c.1.20.1|1/1|tRNA-guanine transglycosylase| OP:NHOMO 1207 OP:NHOMOORG 1004 OP:PATTERN -----------------------1--------11111111111-----21111--------------- 1111-1111111111------1---1------11111111--1---1-----11111112---1-------111111111111111111111-1111--111111111-1111111111111111111111111112222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-11-----11--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111-1111111111111112221211121-11111111111111111111111111-11111111111111111111111111111111111111--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222222211111111111111111111111111111111111111111111111111111111111-1-111111--11111111111111111111-1111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111-1-------------------------1111111111111 2211231-511111-112222222222222222222122222222221111111112111111-----------------------11-1111111----1--2221233434222-21-1122221416F2-2251111222222211-2--11111-31112111223322332113X3322132332-22332321 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 402 STR:RPRED 95.9 SQ:SECSTR ##########cccEEEEEEEcETTEEEEEEEEEETTEEEEEcEEEcEETTcccTTccHHHHHHTTcccEEEcHHHHHHTTcHHHHHHTTcHHHHHTccccEEEcccHHHHHHccccETTc####ccTTccTTHHHHHTcEEEEEccccEEEEccTTccEEEEcHHHHHHHHHHHTccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHTccHcHHHHHHcEEEEEEccTTcHHHHHHHHHHHHHHHcccEEcccEEEEcccccHHHHHHHHHHHGGGccTTccEEETTcccHHHHHHHHHTTccEEEccHHHHHHHHTEEccTTccEETTcGGGTTcccccccccccHHHHHccHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHcc### DISOP:02AL 1-7, 417-419| PSIPRED ccEEEEEcccccccEEEEEEEccccccEEEEEEEcccEEEccEEEEEccccccccccHHHHHHccccHHHHHHHHHHccccHHHHHHHccHHHHHcccccEEEEccccEEEEcccccccccEEcccccccccccccccccEEEEcccccEEcccccccEEEEcHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccEEccccccHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHccccHHHHHHHHHHccccEEEEccccEEEcHHHHHcccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccc //