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Nocardia farcinica IFM 10152 (nfar0)
Gene : thrA
DDBJ      :thrA         putative homoserine dehydrogenase
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  615/915 : Eukaryota  50/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.58.18d.58.3d.81.1
:451 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->302 2ejwA PDBj 2e-36 39.4 %
:RPS:PDB   81->424 3c1nC PDBj 3e-24 12.5 %
:RPS:SCOP  14->111 1zh8A1  c.2.1.3 * 8e-06 20.2 %
:RPS:SCOP  82->193 1t1eA2  d.58.3.2 * 4e-15 9.2 %
:RPS:SCOP  360->447 1phzA1  d.58.18.3 * 3e-10 9.1 %
:HMM:SCOP  15->151 1k5hA2 c.2.1.3 * 1.2e-36 55.9 %
:HMM:SCOP  147->325 1ebfA2 d.81.1.2 * 1.6e-48 47.0 %
:HMM:SCOP  368->443 2fgcA2 d.58.18.6 * 2.2e-12 34.2 %
:RPS:PFM   22->139 PF03447 * NAD_binding_3 1e-09 45.7 %
:RPS:PFM   147->338 PF00742 * Homoserine_dh 1e-29 43.6 %
:RPS:PFM   373->434 PF01842 * ACT 5e-04 30.6 %
:HMM:PFM   147->338 PF00742 * Homoserine_dh 1.5e-63 47.5 179/179  
:HMM:PFM   22->139 PF03447 * NAD_binding_3 1.6e-26 38.7 111/117  
:HMM:PFM   373->432 PF01842 * ACT 1.7e-14 35.0 60/66  
:BLT:SWISS 28->448 DHOM_MYCLE e-130 66.1 %
:PROS 193->215|PS01042|HOMOSER_DHGENASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55894.1 GT:GENE thrA GT:PRODUCT putative homoserine dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1157849..1159204 GB:FROM 1157849 GB:TO 1159204 GB:DIRECTION + GB:GENE thrA GB:PRODUCT putative homoserine dehydrogenase GB:PROTEIN_ID BAD55894.1 LENGTH 451 SQ:AASEQ MTEVAENGGWGADRPIGVAVLGMGNVGTEVVRILREHTDDLRARVGAPVVLRGVAVRNLDKDRGLPADLLTTDAEGLVARPDVDLVVEVIGGIDPARALILAALNAGKSVVTANKALLADYTGELAAAAERNRADLYFEAAVAGAIPVVRPLIQSLSGDRVNRVVGIVNGTTNFILSAMDETGADYSATLAEATRLGYAEADPTADVEGYDAAAKAAILASLAFHTRVTAADVYREGISRITAEDLETASAVNCTVKLLAICERVAAGPGEPSPAEGGKERVSVRVYPALIPRKHPLAAVSGAFNAVVVEAENAGRLMFYGQGAGGAPTASAVLGDLVMAARNKFYGGRAPGESVYAELPIAPIGDTPTRYHVNLQVEDRPGVLAKVAGEFAKHEVSISTVRQEGHGEGARLVVVTHHAMESALADTVAALAEMESVTSVTSVLRLEGTEE GT:EXON 1|1-451:0| BL:SWS:NREP 1 BL:SWS:REP 28->448|DHOM_MYCLE|e-130|66.1|413/441| PROS 193->215|PS01042|HOMOSER_DHGENASE|PDOC00800| SEG 212->223|aaakaailasla| SEG 266->280|aagpgepspaeggke| SEG 305->314|navvveaena| BL:PDB:NREP 1 BL:PDB:REP 18->302|2ejwA|2e-36|39.4|264/331| RP:PDB:NREP 1 RP:PDB:REP 81->424|3c1nC|3e-24|12.5|336/456| RP:PFM:NREP 3 RP:PFM:REP 22->139|PF03447|1e-09|45.7|116/122|NAD_binding_3| RP:PFM:REP 147->338|PF00742|1e-29|43.6|179/179|Homoserine_dh| RP:PFM:REP 373->434|PF01842|5e-04|30.6|62/65|ACT| HM:PFM:NREP 3 HM:PFM:REP 147->338|PF00742|1.5e-63|47.5|179/179|Homoserine_dh| HM:PFM:REP 22->139|PF03447|1.6e-26|38.7|111/117|NAD_binding_3| HM:PFM:REP 373->432|PF01842|1.7e-14|35.0|60/66|ACT| GO:PFM:NREP 5 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF03447|IPR005106| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF03447|IPR005106| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00742|IPR001342| GO:PFM GO:0008152|"GO:metabolic process"|PF01842|IPR002912| GO:PFM GO:0016597|"GO:amino acid binding"|PF01842|IPR002912| RP:SCP:NREP 3 RP:SCP:REP 14->111|1zh8A1|8e-06|20.2|89/181|c.2.1.3| RP:SCP:REP 82->193|1t1eA2|4e-15|9.2|109/179|d.58.3.2| RP:SCP:REP 360->447|1phzA1|3e-10|9.1|88/97|d.58.18.3| HM:SCP:REP 15->151|1k5hA2|1.2e-36|55.9|127/152|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 147->325|1ebfA2|1.6e-48|47.0|164/190|d.81.1.2|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| HM:SCP:REP 368->443|2fgcA2|2.2e-12|34.2|76/0|d.58.18.6|1/1|ACT-like| OP:NHOMO 840 OP:NHOMOORG 725 OP:PATTERN ------1111111111-111111111111111112111111111111111111111111111111-11 1221111111111111111-11111111111111111111111111111111112111111111111111111111111111111111---------------111---2-----------------1--1---1-21122111-111111111111111111111111111111111111111111111221133333333233333333111133311211--111111411111111111111111111111-111121--22--11-1-111111111111111111111111-11-------------111111111111111222222212112221---122-11211122111111112221--11111111-11-1111111111111111111111111-1111111111111111112212111111111111111111111111111111111-----------------------------11111111111211122211111111111111111111111111112221121211111211111111111111111-1111111111111-1111111112111-111111111111111111111111111111----11----1------------1-------1-1111------1-1--1-1--11111-----1-111-1--1---1---111-1----1-----------------11111---------------------------111111-11-----------22222211111111111212221211111---------1------------------1---------1111111111--------------------------------------1--1-111111 --------11----1--1-11111111-------------1-----11111111111111111---------------------11----------------------3------------------------------------------------------1---------1----1811----111--12312111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 440 STR:RPRED 97.6 SQ:SECSTR ###########ccEEEEEEEEcccHHHHHHHHHHHHTGGGGGGGTEEEEEEEEEcccTTccccccGcccHGGEEccccccHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEcTcccTTcccEEEEcHHHHHHHHHTTTcEEEEETTEEEETTccEEEccTTHHHHHHHHHHHHHHTccEEEEEEcccccccccTTTcTTcccccEHHHHHHTccTTcccccHHHHHHHHHHTccEEEEETTcTETTTEETcccEEEEcccccccEEEEEEEEEEEEEEEccccTTTTHHHHHHHHHHTTTccccEEEccTTccEEEEEEEGGGHHHHHHHHHTTccccEEEEEEEEEEEEEEcGGGTTcTTHHHHHHHHHHHHTccEEEEEEccccTTEEEEEEEGGGHHHHHHHHHHHHHHHHTccEEEEEEEEccEEE DISOP:02AL 450-451| PSIPRED ccHHHHHcccccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccHHHHHccHHHHHccccccEEEEEccccHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHccccEEEEccHHccHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccEEcccccEEEEEEEccccEEEEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccccHHHccccEEEEEEEEcccHHHHHHHHHHHHccccHHHHHccccccccEEEEEcccccHHHHHHHHHHHHcccccccccEEEEEEcccc //