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Nocardia farcinica IFM 10152 (nfar0)
Gene : thrS2
DDBJ      :thrS2        putative threonyl-tRNA synthetase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  908/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.51.1d.104.1
:419 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->405 1nyrB PDBj 5e-94 44.1 %
:RPS:PDB   20->327 2dq0A PDBj 6e-47 19.5 %
:RPS:SCOP  20->312 1evkA2  d.104.1.1 * 8e-89 36.7 %
:RPS:SCOP  314->405 1evkA1  c.51.1.1 * 9e-13 31.9 %
:HMM:SCOP  20->307 1nyrA4 d.104.1.1 * 1.3e-80 39.9 %
:HMM:SCOP  310->414 1hc7A1 c.51.1.1 * 1.3e-21 36.5 %
:RPS:PFM   51->208 PF00587 * tRNA-synt_2b 8e-19 31.8 %
:RPS:PFM   358->405 PF03129 * HGTP_anticodon 9e-05 35.4 %
:HMM:PFM   51->208 PF00587 * tRNA-synt_2b 7.7e-37 29.9 157/173  
:HMM:PFM   322->408 PF03129 * HGTP_anticodon 5.1e-15 33.7 86/94  
:BLT:SWISS 20->405 SYT_STRGC e-100 47.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56226.1 GT:GENE thrS2 GT:PRODUCT putative threonyl-tRNA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1545652..1546911) GB:FROM 1545652 GB:TO 1546911 GB:DIRECTION - GB:GENE thrS2 GB:PRODUCT putative threonyl-tRNA synthetase GB:PROTEIN_ID BAD56226.1 LENGTH 419 SQ:AASEQ MPGAFRCGHSSVDARRPMYDHRKLGRELDLFDTDPLIGSGLPYWLPSGGALRHALEEYIRTAEHRAGYRHVHSPVLGKRELYEISGHWAHYREDMYPPMDVGGEQVVLRPSLCPHHALIYRSRSHSYRELPLRIAELGAMYRAELSGVLGGLSRVRAIHLNDAHIFCTEDQVGAEVHAALAMIARAHAALGIAPHRFRLSLPGPGGKYVPNPAMWERATGVLVEALRAAGIDYEPADDEAAFYGPKIDVQFLDSAGREFTLSTVQVDFHQPEQFDLCYIGADGAKHRPVMVHRSIIGSVERAVAHLVEVHGGAFPVWLAPTQVVVLPLAGEQHAAAEDVVRVLRAADVRAELAGHDQGSLGARIRAGRQVPYQVVVGPKEVAAGTLAVRLRSGEQLAPLPVSDFLARVDRVVRAHAAEL GT:EXON 1|1-419:0| BL:SWS:NREP 1 BL:SWS:REP 20->405|SYT_STRGC|e-100|47.4|386/647| SEG 177->193|haalamiarahaalgia| SEG 334->353|aaaedvvrvlraadvraela| SEG 406->417|arvdrvvrahaa| BL:PDB:NREP 1 BL:PDB:REP 9->405|1nyrB|5e-94|44.1|397/637| RP:PDB:NREP 1 RP:PDB:REP 20->327|2dq0A|6e-47|19.5|272/447| RP:PFM:NREP 2 RP:PFM:REP 51->208|PF00587|8e-19|31.8|157/170|tRNA-synt_2b| RP:PFM:REP 358->405|PF03129|9e-05|35.4|48/91|HGTP_anticodon| HM:PFM:NREP 2 HM:PFM:REP 51->208|PF00587|7.7e-37|29.9|157/173|tRNA-synt_2b| HM:PFM:REP 322->408|PF03129|5.1e-15|33.7|86/94|HGTP_anticodon| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 2 RP:SCP:REP 20->312|1evkA2|8e-89|36.7|289/291|d.104.1.1| RP:SCP:REP 314->405|1evkA1|9e-13|31.9|91/110|c.51.1.1| HM:SCP:REP 20->307|1nyrA4|1.3e-80|39.9|288/291|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 310->414|1hc7A1|1.3e-21|36.5|104/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1694 OP:NHOMOORG 1170 OP:PATTERN 1111111111111111111111-111111111111111111111111111111111111111111111 1111311111111111111-11111111111111112211222223222222222222223221113131212222221111111111111111111--1111111111111111111111111111111111111111111111133111121111111111111122111111111111111111111211122222222222222221222222211121111111111211111111111111121121111111111111111111111111111111111111111111111111111111111111111111111121112111111111221111111211121111111111111111112111111111111111111211111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111121111111221111111111111111111111121111111111111111111211111111111111111111111111121211111111111111111111111111111122111111112222111111111111111-1111111111132222222222222222-22222222222222222222232221222222222222222221222222221222222222222111111111111111212212222111221111111111111111111112111111111111111111111111111111211111111111111111111111111111111111111111111-11111111111111111111111111111111 1111222-311122211222222222222222222122222222222222222212222222222222222122222-2322222222-1311111111111222212A323733543323333463639T3-66B3333833442334332484433213A11121311512322222F2222242442332242223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 399 STR:RPRED 95.2 SQ:SECSTR ######HHHHccHHEEcHHcHHHHHHHTTcEEcHHHTcTTccEEcHHHHHHHHHHHHHHHHHHHHTTcEEEccccEEcHHHHHTTccTTHHHHTccccTTccccccEEcccTHHHHHHTTTTEEEETTTccEEEEEEEEEEcccTTccccccccccEEEEEEEEEEEcTTTHHHHHHHHHHHHHHHHHHHTTccEEEEEcEccTTTccTcGGGcccccTTEEEEEEEEEEETcEEEEEEEEETTTTEEEEEEEEEEcTTTTcccccTTcTHHHHTEEEEccTTcccEEcEEEEEEEEEHHHHHHHHHHHcccTTcGGGHHcccEEcccccHHHHHHHHHHHHHHHTTTcccEEEcccccHHHHHHHHTTccEEEEEcHHHHTccEEEEEETTTccEEEEEHHHHH############## DISOP:02AL 416-419| PSIPRED ccccccccccccccccccccHHHHHHHcccccccHHHccccHHHccHHHHHHHHHHHHHHHHHHHcccEEEccccEEcHHHHHHccccccccccEEEEEcccccEEEEEccccHHHHHHHHHHcccHHHccHHHHHHccEEEEccccccccHHHHHEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccEEcccccccccccEEEEEEEccccEEEEcccEEEcccccEEEEEEEcccccEEEEEEEEcccccHHHHHHHHHHHHHccccccHHcccEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHccccEEEEEccHHHHccEEEEEEccccEEEEEcHHHHHHHHHHHHHHHHHcc //