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Nocardia farcinica IFM 10152 (nfar0)
Gene : trpC
DDBJ      :trpC         putative indol-3-glycerol phosphate synthase
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  732/915 : Eukaryota  119/199 : Viruses  0/175   --->[See Alignment]
c.1.2
:333 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   113->280 1piiA PDBj 2e-30 43.7 %
:RPS:PDB   107->258 1b3oA PDBj 7e-21 13.8 %
:RPS:SCOP  107->281 1a53A  c.1.2.4 * 2e-64 40.7 %
:HMM:SCOP  71->321 1i4nA_ c.1.2.4 * 4e-85 49.8 %
:RPS:PFM   109->280 PF00218 * IGPS 4e-43 58.7 %
:HMM:PFM   64->316 PF00218 * IGPS 2.5e-83 48.2 253/255  
:BLT:SWISS 60->330 TRPC_MYCS2 e-101 78.2 %
:PROS 112->129|PS00614|IGPS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56706.1 GT:GENE trpC GT:PRODUCT putative indol-3-glycerol phosphate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2030628..2031629 GB:FROM 2030628 GB:TO 2031629 GB:DIRECTION + GB:GENE trpC GB:PRODUCT putative indol-3-glycerol phosphate synthase GB:PROTEIN_ID BAD56706.1 LENGTH 333 SQ:AASEQ MRVPIPPSRRHGAPDLPPATEDNPAAAAQGTPIYSLSTSVRQRLRGFLGSKRRLPRKDSSQMTVLDSILDGVRADVAAREALLDFQSIKAAAAKAPAPLDARAALLEDGIGVIAEVKRASPSKGALADIPDPASLAKAYEDGGARVISVLTEGRRFGGSLDDLDAVRATVNIPILRKDFVVGPYQIHEARAHGADVILLIVAALEQDVLASLIDRTESLGMTALVEVHTEEEADRALEAGASVIGVNARNLKTLEVDRDVFARIAPGLPTEVIRVAESGIRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVSELVTAGTHPSCPKPARRGR GT:EXON 1|1-333:0| BL:SWS:NREP 1 BL:SWS:REP 60->330|TRPC_MYCS2|e-101|78.2|271/272| PROS 112->129|PS00614|IGPS|PDOC00536| SEG 89->106|kaaaakapapldaraall| SEG 284->304|adllayagagadavlvgeglv| BL:PDB:NREP 1 BL:PDB:REP 113->280|1piiA|2e-30|43.7|167/452| RP:PDB:NREP 1 RP:PDB:REP 107->258|1b3oA|7e-21|13.8|152/304| RP:PFM:NREP 1 RP:PFM:REP 109->280|PF00218|4e-43|58.7|172/253|IGPS| HM:PFM:NREP 1 HM:PFM:REP 64->316|PF00218|2.5e-83|48.2|253/255|IGPS| RP:SCP:NREP 1 RP:SCP:REP 107->281|1a53A|2e-64|40.7|172/247|c.1.2.4| HM:SCP:REP 71->321|1i4nA_|4e-85|49.8|249/0|c.1.2.4|1/1|Ribulose-phoshate binding barrel| OP:NHOMO 963 OP:NHOMOORG 909 OP:PATTERN 11-1--1111111111-111111111111111111111111111111111111111--1--111--11 1111222222211111111-11111111111111111111111111111111111111--1111111121111111-1----111111111111---111-111111111--------11-----11111111111111111111111211111111111111111123311111111111111111111-11111111111-111111111111111111111111111111-1111111111111111111----11-----11--11----1-111-------11111111111111-------------1--111----11-11----------1-11----1-1--11111112111--111111--11111111-----221111111111111111111111-11111111111-1111111111111211111111111111111111111111111-----------------------------11111111111111211111111111111111111111111112111111111111111111111111111111111-11111111111111111111111111111211111111111-1111111111111111111111111111111111111111111111--1111111-1111111111111-111111-1111111111111111111111111111111111111111111111111111-11111111111111-111-11111111111111111-11111-111111111111111111111111111111211111111111111111111111111111111111111111-111111--------------------------------------1--1-111112 ------1-----1111111-111121111111111111-1111111111111111111111111111111111111111111111111-13112121111111111-12------------------------------------------------------1-----------211191111122321233311112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 76.0 SQ:SECSTR ##############################################################ccccHHHHHHHHHHHTcccc####ccccccccccHHHHHHHHHHHHHHHHHHHHHHHcTTcEEEEEEEccHHHHHHHHHTTccEEEEccccccHHHHHHHHHHHHGGGTccEEEEcccccHHHHHHHHHTTccEEEEcTTTTTcccccccccccHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHTccEEEEccTTHHHHHHHccTTcEEEEEcccccHHHHHccccGGGEEEEEcHHHHTcccHHHHHHHHHHH############## DISOP:02AL 1-4, 37-62, 323-333| PSIPRED cccccccHHHcccccccccccccHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHcccccEEEEEEEcccccccccccccHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccEEEHHHHHccHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHccccEEEEccHHHccccHHHHHHHHHHHHccccccccccccc //