[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : yrbE2A
DDBJ      :yrbE2A       putative YrbE family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  455/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
:281 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   61->245 PF02405 * DUF140 9e-23 36.8 %
:HMM:PFM   59->271 PF02405 * DUF140 7.2e-64 37.6 213/215  
:BLT:SWISS 75->245 Y1045_SYNY3 9e-19 28.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55958.1 GT:GENE yrbE2A GT:PRODUCT putative YrbE family protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1239993..1240838 GB:FROM 1239993 GB:TO 1240838 GB:DIRECTION + GB:GENE yrbE2A GB:PRODUCT putative YrbE family protein GB:PROTEIN_ID BAD55958.1 LENGTH 281 SQ:AASEQ MTPEIRTADRVSATAIVRKNFSDTVVSSLRTFGRAVGIAQESVTGTVGDLIRREFQWREALLQAWRLVTVTAVPAILMAVPFGVIVSIQVGNLIHTLGADSLVGATGGLGVIKQGAPMATGFLLGGAGAAAIAADLGARTIREEIDALHTMGISPIHRLVIPRMVAMLIVAPLLNVLVIFVGVLAGYAVAIGGQDVTPGSYWATFGSFTSTADVWVSLGKALIFGFLVVIIACQRGLEAKGGPRGVADAVNAAVVLSVVSIVCVNLLLTQVTAMFLPTRLA GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 75->245|Y1045_SYNY3|9e-19|28.1|171/263| TM:NTM 5 TM:REGION 63->85| TM:REGION 113->135| TM:REGION 164->186| TM:REGION 216->238| TM:REGION 248->270| SEG 119->138|atgfllggagaaaiaadlga| SEG 246->268|vadavnaavvlsvvsivcvnlll| RP:PFM:NREP 1 RP:PFM:REP 61->245|PF02405|9e-23|36.8|185/215|DUF140| HM:PFM:NREP 1 HM:PFM:REP 59->271|PF02405|7.2e-64|37.6|213/215|DUF140| OP:NHOMO 684 OP:NHOMOORG 467 OP:PATTERN -------------------------------------------------------------------- 111-----------78733-371176444446B6A68749----------------------2-122111-------------11111-----1-----1-1--112111-------111----111111111131----------1121112111111111112111111111111111111-------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1212111--------221-11-211--------------------112-----11-11--1--221-112122--1--------2112211211-1-111--11-------------1111-112121111-122221211111112111111211212111222--1--11122-122221211-------1221112221112323311111212323221111232111--111111-1--------12111221-212--1-121111121111111111111----211------111111-1111111111-111111111111111111111111---111111111111111111111111--111111111111----11111111----11---111-----1--1--11-11---2-11111111222222111121212212111111111112121-1111111111111---1221111----------------------------------------------121 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1111611111---2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 6-8| PSIPRED ccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //