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Nocardia farcinica IFM 10152 (nfar0)
Gene : yrbE3A
DDBJ      :yrbE3A       putative YrbE family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  252/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
:287 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   147->252 PF02405 * DUF140 1e-16 46.2 %
:HMM:PFM   65->277 PF02405 * DUF140 3.7e-63 37.1 213/215  
:BLT:SWISS 147->254 Y1045_SYNY3 5e-14 33.3 %
:PROS 169->199|PS00475|RIBOSOMAL_L15
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57825.1 GT:GENE yrbE3A GT:PRODUCT putative YrbE family protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3162343..3163206) GB:FROM 3162343 GB:TO 3163206 GB:DIRECTION - GB:GENE yrbE3A GB:PRODUCT putative YrbE family protein GB:PROTEIN_ID BAD57825.1 LENGTH 287 SQ:AASEQ MSGEYAPAAVWPPDSTDEQRASAVLVLRGRILSAVRTFGRTVRLGVRATVLAVADLAAGRFPLREAVVQAWFFASVSLLPAILISLPMGVVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAPLAAALLVGGAGASAIASDLGARTIREEIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVLVILMSILASFLVASVGQGVAPGSYWLSFGSFASVTDLVICLGKSAVFGYLVAVIASQRGLQAQGGPKGVADCVNAAVVLGLLACLVVNLIITQIVLLFVPMGLL GT:EXON 1|1-287:0| BL:SWS:NREP 1 BL:SWS:REP 147->254|Y1045_SYNY3|5e-14|33.3|108/263| PROS 169->199|PS00475|RIBOSOMAL_L15|PDOC00386| TM:NTM 6 TM:REGION 30->52| TM:REGION 72->94| TM:REGION 114->136| TM:REGION 172->194| TM:REGION 216->238| TM:REGION 257->279| SEG 103->118|vgagsmagavggmgvm| SEG 122->144|aplaaallvggagasaiasdlga| SEG 255->272|cvnaavvlgllaclvvnl| RP:PFM:NREP 1 RP:PFM:REP 147->252|PF02405|1e-16|46.2|106/215|DUF140| HM:PFM:NREP 1 HM:PFM:REP 65->277|PF02405|3.7e-63|37.1|213/215|DUF140| OP:NHOMO 402 OP:NHOMOORG 262 OP:PATTERN -------------------------------------------------------------------- -11-----------78733-371176444446D6866637----------------------2-122111--------------1111-------------------2-1--------------111-11111-21-----------11-1111111111111-211111111111111-111-------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111----------1221-11-212----------------------2---------------111-111111-----------1--111-211---111-1-----------------1--11212-----1-11111111111--111111111111-11111--1---112---11-1-------------1--12-12-11-222--1-1112111111111-111-1--11111--1--------1211-11--1-1-----11111112111111111111----2------------11-------------------------------------------------------1---------1-------------1-------------1----1-------1-----------------------111111---1-1-1--1-1------------1-------------------111111----------------------------------------------121 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111711111---1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4| PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //