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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56585.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  497/915 : Eukaryota  28/199 : Viruses  0/175   --->[See Alignment]
a.182.1
:156 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->151 1ng6A PDBj 4e-23 33.3 %
:RPS:PDB   8->123 3bmaE PDBj 2e-13 9.8 %
:RPS:SCOP  8->151 1ng6A  a.182.1.1 * 1e-39 33.3 %
:HMM:SCOP  6->152 1ng6A_ a.182.1.1 * 1.4e-43 40.1 %
:RPS:PFM   11->151 PF09424 * YqeY 2e-25 54.6 %
:HMM:PFM   9->151 PF09424 * YqeY 3.5e-54 53.8 143/143  
:BLT:SWISS 8->151 YQEY_BACSU 1e-22 33.3 %
:REPEAT 2|9->79|83->152

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56585.1 GT:GENE ABA56585.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 40801..41271 GB:FROM 40801 GB:TO 41271 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA56585.1 GB:DB_XREF GI:76881904 InterPro:IPR003789 LENGTH 156 SQ:AASEQ MVADGSPLKARLQEEVKIAMRAKDKARLGILRMVMAALKQFEVDTRKPLDDAQVIALLDKMLKQRRESLAQYEAAGRTDLAEKERFEEEVIQSYMPTPLSEVEVEQLIEEAISQCQATTARDMGKVMALLKPNLQGRADMAVASAKVKARLEAISS GT:EXON 1|1-156:0| BL:SWS:NREP 1 BL:SWS:REP 8->151|YQEY_BACSU|1e-22|33.3|144/148| NREPEAT 1 REPEAT 2|9->79|83->152| BL:PDB:NREP 1 BL:PDB:REP 8->151|1ng6A|4e-23|33.3|144/148| RP:PDB:NREP 1 RP:PDB:REP 8->123|3bmaE|2e-13|9.8|112/390| RP:PFM:NREP 1 RP:PFM:REP 11->151|PF09424|2e-25|54.6|141/143|YqeY| HM:PFM:NREP 1 HM:PFM:REP 9->151|PF09424|3.5e-54|53.8|143/143|YqeY| RP:SCP:NREP 1 RP:SCP:REP 8->151|1ng6A|1e-39|33.3|144/148|a.182.1.1| HM:SCP:REP 6->152|1ng6A_|1.4e-43|40.1|147/148|a.182.1.1|1/1|GatB/YqeY motif| OP:NHOMO 525 OP:NHOMOORG 525 OP:PATTERN -------------------------------------------------------------------- 11---111111-1--1111-1---11111111-11111111--11--1-----11-------1-1-111--1--------111--1111111-111---11-1111111----------------11111111111---1111111-11---------------------1------------------1-111111111111111111111111111111111111111111--------------------111-11-1111111111111111-----------------------------------------------11111111111111111--1111-11--1--1-11-1--111111111--1-------1--1111111111111111111111111-11111111111-11111111111111111111111111111111111111--111-----------------------------111111111111-11111111111111111-11111111111111111111111111111111111111111111-11-----111111111111-1111-11111-11111111111-1---------11-111111-1111-1111111111111111111111--11111--------------------------------------------------------------------------------------------1111-11111111-1---------------1111111111-11111-------------11111111111111111111111111111111111111--1-111111------------------------------------1111111111111 ------------1-1--11----1------------1-------11--111111-11--------111---------1---------1-1---1---------111----------------------------------------------------------------------11--------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 92.3 SQ:SECSTR #######HHHHHHccccHHHHHHHHHHHHHcTTcTTHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHTHHHHTHHGGTccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHTTTccHHHHHHHHHHHc##### DISOP:02AL 1-5, 154-156| PSIPRED cccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcc //