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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56675.1
DDBJ      :             MotA/TolQ/ExbB proton channel
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  502/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:225 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   110->209 PF01618 * MotA_ExbB 6e-24 52.0 %
:HMM:PFM   80->211 PF01618 * MotA_ExbB 1.2e-43 41.7 132/139  
:HMM:PFM   20->48 PF00558 * Vpu 0.0003 31.0 29/81  
:BLT:SWISS 6->224 TOLQ_PSEAE 6e-61 52.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56675.1 GT:GENE ABA56675.1 GT:PRODUCT MotA/TolQ/ExbB proton channel GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 153501..154178 GB:FROM 153501 GB:TO 154178 GB:DIRECTION + GB:PRODUCT MotA/TolQ/ExbB proton channel GB:PROTEIN_ID ABA56675.1 GB:DB_XREF GI:76881994 InterPro:IPR002898 LENGTH 225 SQ:AASEQ MTVDLSLLDLITGASFLVQLVILILLIISVIAWTLIFRKRSELKQAREEADEFEDRFWSGKELNSLYAELAAQELPPGGMEGIFLAGFSEFARLRKQAGVEHRTVLDGTQRAMRVSLAREIDMLEASLPFLATAGSTSPYIGLFGTVWGIMNSFRGLGNAHQATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRYAYEVERLANRYDTFVEEFSTILQRQIHTV GT:EXON 1|1-225:0| BL:SWS:NREP 1 BL:SWS:REP 6->224|TOLQ_PSEAE|6e-61|52.1|219/231| TM:NTM 3 TM:REGION 9->31| TM:REGION 129->151| TM:REGION 168->190| SEG 17->31|lvqlvililliisvi| RP:PFM:NREP 1 RP:PFM:REP 110->209|PF01618|6e-24|52.0|100/132|MotA_ExbB| HM:PFM:NREP 2 HM:PFM:REP 80->211|PF01618|1.2e-43|41.7|132/139|MotA_ExbB| HM:PFM:REP 20->48|PF00558|0.0003|31.0|29/81|Vpu| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF01618|IPR002898| GO:PFM GO:0008565|"GO:protein transporter activity"|PF01618|IPR002898| GO:PFM GO:0016020|"GO:membrane"|PF01618|IPR002898| OP:NHOMO 1042 OP:NHOMOORG 505 OP:PATTERN -------------------------------------------------------------------- 222---------------------------------------------------------------------------------1111---1----1--1-----11-1----------1----122111211214------------------------------1----------------11-----1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1111222222222433444526444422222222222-22322232124-1222112111222211111222221116666666612232232111-------111111111111111----123121222223455636333333533333239592222223226433323363334234334211111112222423121111121222111112212144344332112331332222221111111321--22222111111111111111111111111111--11112------22231222222222222-222222222222222222222244222222222222222222222222222212222222222221111111111111411112221111111-21114444454232633333455522323366611111111111111111111111133222222222222112-111111----------------------------------------------211 --------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------1--------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 67-78, 92-107| PSIPRED ccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //