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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56732.1
DDBJ      :             Acriflavin resistance protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  663/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.55.1d.225.1d.58.44f.35.1
:1028 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->1006 2v50B PDBj e-101 26.9 %
:RPS:PDB   5->980 3d9bA PDBj e-150 24.8 %
:RPS:SCOP  61->214 1mwkA2  c.55.1.1 * 5e-30 14.5 %
:RPS:SCOP  272->456 1iwgA8  f.35.1.1 * 4e-24 12.4 %
:RPS:SCOP  553->645 1iwgA3  d.58.44.1 * 9e-10 15.1 %
:RPS:SCOP  700->786 1iwgA6  d.225.1.1 * 2e-17 28.7 %
:RPS:SCOP  805->1005 1iwgA8  f.35.1.1 * 1e-28 32.8 %
:HMM:SCOP  40->135 1iwgA1 d.58.44.1 * 1.7e-19 35.4 %
:HMM:SCOP  134->323 1iwgA2 d.58.44.1 * 4.1e-26 35.2 %
:HMM:SCOP  289->490 1iwgA7 f.35.1.1 * 2.8e-48 42.7 %
:HMM:SCOP  553->651 1iwgA3 d.58.44.1 * 1.5e-15 27.3 %
:HMM:SCOP  650->835 1iwgA4 d.58.44.1 * 1.5e-18 33.3 %
:HMM:SCOP  782->1012 1iwgA8 f.35.1.1 * 7.4e-44 29.3 %
:RPS:PFM   7->1006 PF00873 * ACR_tran e-158 33.4 %
:HMM:PFM   4->1005 PF00873 * ACR_tran 9.7e-258 35.1 1002/1021  
:BLT:SWISS 1->1010 Y895_HAEIN e-171 35.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56732.1 GT:GENE ABA56732.1 GT:PRODUCT Acriflavin resistance protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 218757..221843 GB:FROM 218757 GB:TO 221843 GB:DIRECTION + GB:PRODUCT Acriflavin resistance protein GB:PROTEIN_ID ABA56732.1 GB:DB_XREF GI:76882051 InterPro:IPR001036 LENGTH 1028 SQ:AASEQ MKFTDLFVRRPVLASVVSLLILLIGMRSLTLLEVRQYPETENTVVTVSTAYPGASSELINGFITTPLQQAIAEAEGIDYLVATSTQGHSIIEAHMVLNYDSNAAVAEIQAKVASQRNVLPEEAENPVIDSTTGDSTALMYMAFYSEAMSPAQITDYLLRVVRPKLQAVPGVSKAQLIGNKTFAMRIWLDPRRMAALGVTANDVREVLLENNYLASVGHTKGAYVAVDLSATTDISREEDFLNLVVREADGALVRLRDVAEPQLGAEDYDSSNWYNGKPAIFIGIEQAPGANPLDIAGHLHDLMPEIRRQLPSGVDGYIVYDASAYIEDAIREVFRTLAEAVLVVLVVIFLFLGSLRAALVPAIAVPLSLIGGAFLMLVLGFSLNLLTLLAMVLAIGLVVDDAIIVVENIHRHLEHGESRFQAAIHGARELGLPIIAMTTTLVAVYAPIGFMGGLVGTLFTEFAFTLASAVLVSGVVALTLSPMLSSKMLRPVSEAGRFEQWVERFFTRLAGYYLRLLRYALESLPVVIVFAGAILCSIYFMYVTSQNELAPTEDQSILFFQATAPQTATIDYDEAYSRQIIDIFESFPEYHESFLLLGQGGDPSTVFGGFKMPVPSQRERSQMEIQPEMQQKLQGIAGFQIAVFPRPSLPGSGGGLPLQFVITSAADFSRLDQIAEELIRQSMASGKFAFLQKSVKFSRPKTTLKINRDLAGDLGIRMKDIGQNLGIMLGGGYINWFNLEGRSYKVIPQVDRRYRLDQEMLENYYIRTGAGELIPLATLISFEETVEPSKRVQFQQLNSLTVQGVMAPGVAVGEALAYLEDKAREIFPSAFSWDYAGESRQYTQQGSALMVTFFFSLLVIYLVLAAQFESWRDPVIILMSVPMSIAGALVFLTLGFATVNIYTQVGLITLIGLIAKNGILIVEFANQLQLQEGLDKQAAVEKASSIRLRPILMTTVSMIVAMVPLLMASGPGAVSRFDIGLVVASGLGIGTLFTLFVVPAVYLLVAGDHREEKEAVQEPMEQESGFKA GT:EXON 1|1-1028:0| BL:SWS:NREP 1 BL:SWS:REP 1->1010|Y895_HAEIN|e-171|35.1|1008/1032| TM:NTM 12 TM:REGION 11->33| TM:REGION 335->357| TM:REGION 361->383| TM:REGION 387->409| TM:REGION 432->454| TM:REGION 462->484| TM:REGION 522->544| TM:REGION 847->867| TM:REGION 875->897| TM:REGION 905->927| TM:REGION 949->971| TM:REGION 981->1003| SEG 12->24|vlasvvsllilli| SEG 337->352|laeavlvvlvviflfl| SEG 383->397|lnlltllamvlaigl| SEG 465->481|tlasavlvsgvvaltls| SEG 508->521|rlagyylrllryal| SEG 647->658|pslpgsggglpl| BL:PDB:NREP 1 BL:PDB:REP 7->1006|2v50B|e-101|26.9|993/1030| RP:PDB:NREP 1 RP:PDB:REP 5->980|3d9bA|e-150|24.8|974/1045| RP:PFM:NREP 1 RP:PFM:REP 7->1006|PF00873|e-158|33.4|998/1014|ACR_tran| HM:PFM:NREP 1 HM:PFM:REP 4->1005|PF00873|9.7e-258|35.1|1002/1021|ACR_tran| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00873|IPR001036| GO:PFM GO:0006810|"GO:transport"|PF00873|IPR001036| GO:PFM GO:0016020|"GO:membrane"|PF00873|IPR001036| RP:SCP:NREP 5 RP:SCP:REP 61->214|1mwkA2|5e-30|14.5|145/163|c.55.1.1| RP:SCP:REP 272->456|1iwgA8|4e-24|12.4|181/222|f.35.1.1| RP:SCP:REP 553->645|1iwgA3|9e-10|15.1|93/107|d.58.44.1| RP:SCP:REP 700->786|1iwgA6|2e-17|28.7|87/88|d.225.1.1| RP:SCP:REP 805->1005|1iwgA8|1e-28|32.8|201/222|f.35.1.1| HM:SCP:REP 40->135|1iwgA1|1.7e-19|35.4|96/0|d.58.44.1|1/2|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 134->323|1iwgA2|4.1e-26|35.2|105/0|d.58.44.1|2/2|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 289->490|1iwgA7|2.8e-48|42.7|199/200|f.35.1.1|1/2|Multidrug efflux transporter AcrB transmembrane domain| HM:SCP:REP 553->651|1iwgA3|1.5e-15|27.3|99/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 650->835|1iwgA4|1.5e-18|33.3|99/0|d.58.44.1|2/2|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 782->1012|1iwgA8|7.4e-44|29.3|222/223|f.35.1.1|2/2|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 4503 OP:NHOMOORG 672 OP:PATTERN -------------------------------------------------------------------- D9K-------------------------------------------11-1--111-11--11-----1111------------44365FGIE-H23---23G4B7LBJ8C--------------342344533465111111--1-68556551122222534362E47A4-2-----2-----2111--11212222222222222221111212212112122------6311111111111111111111-----------------------------------------------------------------------6116-------1-1-1221--------1-13122522213-1-----31E3CG77C11111BEOKRI9HLIIFD46574664547-MPGFOKLL5A9-GAACBBDBBA8ABL7AA7395655544888888887CB866A61111111111--1-221341113311-111338936755BDHIGIBA7776CCGGAAAA7BDBHCGGM-5FHF7CA9BNFA7A7AGG9FAC8A111111196B6BF75A246764895531684779B77AB9AE92A62111222222333333333753598A875IE9JCDB6DEFFEGFKLFFHHDJQKLG--1D85B------76677B67999788A77-6887789768797777777CDC773456545666666546455A64664761-877777765777--17343335989H9C662111121111111117779759222A8DEEECCEFCDFEB99BC111111111B5AAA666669CDCBGHDAEAA8AA54542297BB36BB11111111-----------------------------1---111118C6 -------------1---------------------------------------------------------------------------------1--------------------------------------------------------------5----6-3-------5-----------1--E-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1001 STR:RPRED 97.4 SQ:SECSTR ####HHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccTTccHHHHHTTTHHHHHccccccTTEEEcccEEETTEEEcccEEcTTccHHHHHHHHHHHHHTTGGGccHHHHHHccEEEEccccccEEEEEEEccccHHHHHHHHHHHTHHHHHHcTTcccEEEEccccEEEEEEEcHHHHHHTTccHHHHHHHHHHHcccccccccTTccccEEcccccccccHHHHHTcEEEcTTccEEEGGGGEEEEEEEcccccEEEETTEEEEEEEEccccccccTHHHHHHHHHHHTTTTcccTTEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTTTHHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHTcTTTEEEEEEEETccccTTEEEEEEEEccGGGcccGGGHHHHHHHHHHTTcTTcEEEEEcccTTccccccEEEEEEEccccTTHHHHHHHHHHHHHHTTcTccEEEEEcccccccEEEEEEcHHHHHHHTccHHHHHHHHHHHHHcEEcccEEccccEEEEEEEEcGGGcccGGGGGGcEEEcccccEEEHHHHEEEEEEccccEEEEETTEEEEEEEEEccTTccHHHHHHHHHHHTTTc#cTTEEEEEcTHHHHcccTTTcHHHHHHHHHHHHHHHHHHHHTcccHHHHHHTTHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH###################### DISOP:02AL 493-498, 645-655, 1008-1028| PSIPRED ccHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHcccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHcccccccccccEEEcccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEcHHHHHHccccHHHHHHHHHHccccccccEEEcccEEEEEEEccccccHHHHHHHHEEcccccEEEEEEEEEEEEcccccccEEEEcccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccEEEEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccEEEEEEEcHHHHHHHcccHHHHHHHHHHHHcccEEEEEEEccEEEEEEEEEcHHHHccHHHHHHEEccccccccEEcccEEEEEEEEcccEEEEEcccEEEEEEEEEcccccHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc //