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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56741.1
DDBJ      :             3-octaprenyl-4hydroxybenzoate decarboxylase
Swiss-Prot:UBID_NITOC   RecName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;         EC=4.1.1.-;AltName: Full=Polyprenyl p-hydroxybenzoate decarboxylase;

Homologs  Archaea  62/68 : Bacteria  458/915 : Eukaryota  30/199 : Viruses  0/175   --->[See Alignment]
b.45.1d.333.1
:487 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->487 2idbA PDBj 0.0 74.7 %
:RPS:SCOP  3->322 2idbA1  b.45.1.3 * e-133 70.1 %
:RPS:SCOP  323->487 2idbA2  d.333.1.1 * 9e-76 78.2 %
:HMM:SCOP  3->322 2idbA1 b.45.1.3 * 3.9e-126 53.1 %
:HMM:SCOP  323->488 2idbA2 d.333.1.1 * 3.3e-63 48.8 %
:RPS:PFM   10->433 PF01977 * UbiD e-164 70.8 %
:HMM:PFM   10->434 PF01977 * UbiD 1.2e-165 51.7 404/407  
:BLT:SWISS 1->487 UBID_NITOC 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56741.1 GT:GENE ABA56741.1 GT:PRODUCT 3-octaprenyl-4hydroxybenzoate decarboxylase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 235195..236658 GB:FROM 235195 GB:TO 236658 GB:DIRECTION + GB:PRODUCT 3-octaprenyl-4hydroxybenzoate decarboxylase GB:PROTEIN_ID ABA56741.1 GB:DB_XREF GI:76882060 InterPro:IPR002830 LENGTH 487 SQ:AASEQ MKYKDLRDFIAKLEAEGELKRITVEVDPYLEMTEICDRVLHAGGPALLFERPKGASMPVLGNLFGTPRRVAQGMGEDSVAALREVGKLLAFLKEPDPPRGMKEAWRALPIFKKVLDMAPKIVRSAPCQEVILEGSQVDLSQIPIQTCWPGDIAPLITWGLVVTKGPYKERQNMGIYRQQVLGPNRVIMRWLAHRGGALDFQAWQQAHPGKPFPIAVALGADPATILGAVTPVPDTLSEYAFAGLLRGSKTELTRCLGSGLQVPASAEIVLEGYLKPGDEANEGPFGDHTGYYNEVEKFPVFTIERLTHRRHPIYHSTYTGRPPDEPAVLGVALNEVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMRKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDEDINARDWKDVIWAMTTRMDPARDCVIIENTPIDYLDFASPVSGLGSKIGFDVTHKWKGETQREWGQPITMDNAVKKRVDEMWDGMGL GT:EXON 1|1-487:0| SW:ID UBID_NITOC SW:DE RecName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase; EC=4.1.1.-;AltName: Full=Polyprenyl p-hydroxybenzoate decarboxylase; SW:GN Name=ubiD; OrderedLocusNames=Noc_0211; SW:KW Cell membrane; Complete proteome; Decarboxylase; Lyase; Membrane;Ubiquinone biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->487|UBID_NITOC|0.0|100.0|487/487| GO:SWS:NREP 5 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016831|"GO:carboxy-lyase activity"|Decarboxylase| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0006744|"GO:ubiquinone biosynthetic process"|Ubiquinone biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 3->487|2idbA|0.0|74.7|462/463| RP:PFM:NREP 1 RP:PFM:REP 10->433|PF01977|e-164|70.8|404/405|UbiD| HM:PFM:NREP 1 HM:PFM:REP 10->434|PF01977|1.2e-165|51.7|404/407|UbiD| RP:SCP:NREP 2 RP:SCP:REP 3->322|2idbA1|e-133|70.1|308/308|b.45.1.3| RP:SCP:REP 323->487|2idbA2|9e-76|78.2|165/166|d.333.1.1| HM:SCP:REP 3->322|2idbA1|3.9e-126|53.1|320/0|b.45.1.3|1/1|FMN-binding split barrel| HM:SCP:REP 323->488|2idbA2|3.3e-63|48.8|166/0|d.333.1.1|1/1|UbiD C-terminal domain-like| OP:NHOMO 694 OP:NHOMOORG 550 OP:PATTERN 2211111222222112222222221----1-1111111111111111111111111121111212-22 111-4---------1-1-----------------------1121----------------21----1111-------------11111-----------------1---111111111111111--------------------1-1-1111111111111111111111--111---1-11-11111-----1---------------1111-1----1-----------11----------------------1--------11--111-1--1------------------------------------------------11-------------------------1--11--11211-22-------1111111-------2----112111--11-111112---1--2-12-1--111--211-23----11-21111----------------112111-------1111211111111111111--11--111111112111111122421111112172231--11111-11---1--11-1---111111111111811--11-111141111-2222223221111---111111111111111111111111111111111111-111111111111111111111---1111------22111111221111121-211222122221211111233221111222222222212222211122221112111111111111111-----11111111-111-1-1----1111----------1122221121111111111----------11111111111111----------------1-111111----------------------------------------------1-- ------------------11-1-2322-------------------1--22345----------1----------111111111------------121----------------------------------------------------------------1--------------------1-----------11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 463 STR:RPRED 95.1 SQ:SECSTR #ccccHHHHHHHHHHTTcEEEEcccccTcTHHHHHHHHHHTTcccEEEEcccTTcc#cEEEcTTccHHHHHTT##cccGGGHHHHHHHHHHHHccccccTTc#############ccccEEEcccGGGcEEEEGGGccGGGccc#cccTTccccEEcccEEEEEccccccEEEEcccEEEccccEEE#ccccccHHHHHHHHHHHHcTTccEEEEEEEcccHHHHHHHHccccTTccHHHHHHHHHccccEEEEccccccEEETTccEEEEEEEEEEEEEEEccEEcTTccEEccEEEEEEEEEEEEEcTTccEEcccccccccHHHHHHHHHHHHHHHHHHHHcTTEEEEEccGGGTTTcEEEEEEccccTTHHHHH##HHHHccGGG#cccEEEEEETTccTTcHHHHHHHHHHc#cHHHHEEEEEEEEccTTcTTcccTTEEEE#EEEccccccTTccccccccccccHHHHHHHHHHTTTccc PSIPRED cccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccEEEEccccHHHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccEEccccccEEEEEEcccccHHHccccccccccccccccccEEEEEccccccccEEEEEEEEEcccEEEEEEEcccccHHHHHHHHHHHccccccEEEEEcccHHHHHHHcccccccccHHHHHHHHccccEEEEEcccccccccccccEEEEEEEcccccccccccccccccccccccccEEEEEEEEEEccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccEEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccHHHHHHHHHHcccccccEEEEccccccccccccccccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHcc //