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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56776.1
DDBJ      :             Penicillin-binding protein 1A
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  829/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.2.1e.3.1
:814 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   66->247 2oqoA PDBj 1e-38 46.0 %
:BLT:PDB   318->426 3d0fA PDBj 4e-06 26.9 %
:BLT:PDB   427->721 2uwyB PDBj 1e-14 26.5 %
:RPS:PDB   185->777 3dwkD PDBj 2e-63 16.5 %
:RPS:SCOP  49->258 2oluA1  d.2.1.10 * 1e-63 34.7 %
:RPS:SCOP  264->322 2c5wB1  e.3.1.1 * 4e-09 17.5 %
:RPS:SCOP  381->775 2oluA2  e.3.1.1 * 7e-56 18.2 %
:HMM:SCOP  215->793 2bg1A1 e.3.1.1 * 4.5e-128 45.2 %
:RPS:PFM   61->233 PF00912 * Transgly 2e-50 53.8 %
:RPS:PFM   431->714 PF00905 * Transpeptidase 1e-35 38.1 %
:HMM:PFM   59->234 PF00912 * Transgly 4.6e-67 54.0 176/178  
:HMM:PFM   430->714 PF00905 * Transpeptidase 4e-34 31.3 243/304  
:BLT:SWISS 22->782 PBPA_PSEAE 0.0 48.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56776.1 GT:GENE ABA56776.1 GT:PRODUCT Penicillin-binding protein 1A GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(270470..272914) GB:FROM 270470 GB:TO 272914 GB:DIRECTION - GB:PRODUCT Penicillin-binding protein 1A GB:PROTEIN_ID ABA56776.1 GB:DB_XREF GI:76882095 InterPro:IPR001264 InterPro:IPR001460 InterPro:IPR011816 LENGTH 814 SQ:AASEQ MTYLLRLFRWMVLLLLTATTVGILVAVGMYFYLLPQLPSTDTLKNIHLQVPLRIYSHDKKLIAQYGEKRRIPLAFEQFPDLLVKAILAAEDDRFYEHPGVDYQGILRAALYLVKTGKKAQGGSTITMQVARNFFLSREKTYLRKFNEILLALQIERELSKQDIIELYLNKIYLGNRAYGAAAAAQVYYGTTLDKLELSQLAMIAGLPKAPSRYNPIANQKRALLRRNYVLRRMREVGYIDPETYQDAAAQPATAKFHELPIELNAPFVAEMARSQMFEKYGSDIYTAGYNVYTTIKAEHQKAANDALRKALLDYDRRHGFRGPERHIELPVDAGEIFYQQALSQRRLANGLVPALVLATDERTSRIYTKTDGEAMLTWEGLSWAQPYLEVNAVGEKPKQAADILKAGDLIWVEALPKGGWRLAQRPRVEGAIVSLSPYNGNITALSGGFDFYESKFNRATQSQRQPGSSFKPFLYSAALNKGYTAASIINDAPIVLDEPGGPDNAWRPENYSGRFYGPTRLRTALTHSRNLVSIRLLRAIGIDYAIEYIQNFGFKAEQLPQSLSLALGSGSASPLEMARGFAVFANGGYLIEPYLIERTENADGKIIFRSRPAQVCQRCEKIKTERTQAYNPTLTADLLNTESAQFNPAPRAITAQNAYLINSMLHDVIRHGTGRRAKKLGRNDLAGKTGTTNDQHDAWFSGFNPELVAVCWVGFDQPESLGSLETGARVALPMWINYMGTVLDGTPEKPFIPPKGMVTVRIDPETGLLADSNASDAIFETFIAGHAPTRYDDSSSEGSDGSTKTDTPVAERLF GT:EXON 1|1-814:0| BL:SWS:NREP 1 BL:SWS:REP 22->782|PBPA_PSEAE|0.0|48.7|756/822| TM:NTM 1 TM:REGION 9->31| SEG 4->16|llrlfrwmvllll| SEG 180->184|aaaaa| SEG 558->575|qlpqslslalgsgsaspl| SEG 792->807|ddsssegsdgstktdt| BL:PDB:NREP 3 BL:PDB:REP 66->247|2oqoA|1e-38|46.0|176/181| BL:PDB:REP 318->426|3d0fA|4e-06|26.9|104/104| BL:PDB:REP 427->721|2uwyB|1e-14|26.5|260/455| RP:PDB:NREP 1 RP:PDB:REP 185->777|3dwkD|2e-63|16.5|550/602| RP:PFM:NREP 2 RP:PFM:REP 61->233|PF00912|2e-50|53.8|173/178|Transgly| RP:PFM:REP 431->714|PF00905|1e-35|38.1|244/289|Transpeptidase| HM:PFM:NREP 2 HM:PFM:REP 59->234|PF00912|4.6e-67|54.0|176/178|Transgly| HM:PFM:REP 430->714|PF00905|4e-34|31.3|243/304|Transpeptidase| GO:PFM:NREP 5 GO:PFM GO:0003824|"GO:catalytic activity"|PF00912|IPR001264| GO:PFM GO:0009252|"GO:peptidoglycan biosynthetic process"|PF00912|IPR001264| GO:PFM GO:0009274|"GO:peptidoglycan-based cell wall"|PF00912|IPR001264| GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 3 RP:SCP:REP 49->258|2oluA1|1e-63|34.7|193/208|d.2.1.10| RP:SCP:REP 264->322|2c5wB1|4e-09|17.5|59/385|e.3.1.1| RP:SCP:REP 381->775|2oluA2|7e-56|18.2|352/400|e.3.1.1| HM:SCP:REP 215->793|2bg1A1|4.5e-128|45.2|400/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 2504 OP:NHOMOORG 837 OP:PATTERN -------------------------------------------------------------------- 333-322222222222222-23222322222233333344233322212223232111115522324644321222221131311111444214111--23443236515---------------2222212222222233---216333333223312122243224673111-11111-11232111124346666666666666665444446673434433222222443333333333333333333332223422323222233322222333333333333333333333333333333333333343333333331212111111211211211111131111322212233222521111212144-766422222555555545555544444444445-7787877765415555666666674534433443442451111111111113335------------2222122211112----1434534444478878756665774566663686467772222243344453452333222332222222222222443532133222222133333333355454434122131121121211111111111122443233322233444333233342422322--11213-1-11144323434444444444-4444444444444344444444334444444444444444443443332342143444444444411131111122223542433333313332322423343333333333334335444443444---------122242222233222444444433344441-136655661111111121--------------------------1-11111111--3 -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1--------------11-----1--4--1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 742 STR:RPRED 91.2 SQ:SECSTR ###############################################ccccEEEEcTTccEEEEEcccccccccGGGccHHHHHHHHHHHcTTTTTcccccHHHHHHHHcTcTTccccccccccHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccTTcccHHHHHEEETccEEEEEcccccccGGGccHHHHHHHHHHHcGGGGTcccccHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHTccccTTccHHHHHHHHHGGGcHHHHcTTTcHHHHHHHHHHHHHHHHHTTcccHHHHHHHTTcccGGGcccccHHHHccccccccGGHHHHHHHHHHTTcGGGccccHHHHTTcccEEEEcccHHHHccccccTTEEEEEEEEETTTccEEEEEccTTccTTTcccTTTccEEcGGGGHHHHTHHHHHHcccTTcEEEcccccccccccTTcccccccTTcccccEEEHHHHHHTTcHHHHHHHHHHHHHHccTTHHHHHHHHTTcccHHHHTTcTTcEEcHHHHHHHHHHHTTTcEEEccccEEEEEcccccEEEEcccHHHHHHHcccccccccEEEEEHHHHHHHTTTcccccEEEcccHHHHHHHHHHHHTTccTTcTTTTccccccccEEEEEETTEEEEEEEEEEcccEEEEEEEEEccccGGGTTHHHHTHHHHHHHHHHHHHccccccccccccTTEEEETTEEEETTcccccccccEEEccEEccEEE######################### DISOP:02AL 790-813| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccEEEEEEcccEEEEEcccccEEccHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccEEccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccEEHHHHHHHHHHcccHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHcccEEEEEEcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEccccccccccHHHcccccccHHHHHHHHHHHHHcccccccEEEcccEEEEEcccccccccEEEccccccccccHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccEEEccEEEEEEEcccccEEEEccccHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccEEEEEEcccEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccccEEEEEEccccccccccccccccccccccccccccccc //