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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56789.1
DDBJ      :             SSU ribosomal protein S6P modification protein
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  225/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.142.1
:307 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   83->287 1uc9B PDBj 8e-10 30.9 %
:RPS:PDB   60->270 1a9xA PDBj 7e-19 16.3 %
:RPS:SCOP  102->290 1eyzA3  d.142.1.2 * 6e-16 9.8 %
:HMM:SCOP  101->294 1gsaA2 d.142.1.1 * 4.2e-37 34.3 %
:RPS:PFM   102->273 PF08443 * RimK 7e-17 36.6 %
:HMM:PFM   101->287 PF08443 * RimK 2.8e-30 31.5 181/190  
:BLT:SWISS 60->290 MPTN_METMP 2e-32 36.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56789.1 GT:GENE ABA56789.1 GT:PRODUCT SSU ribosomal protein S6P modification protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(285186..286109) GB:FROM 285186 GB:TO 286109 GB:DIRECTION - GB:PRODUCT SSU ribosomal protein S6P modification protein GB:PROTEIN_ID ABA56789.1 GB:DB_XREF GI:76882108 InterPro:IPR004666 LENGTH 307 SQ:AASEQ MLRIVIFNNSHGWHSKQLEAALAPQGVAIIRSNLAQCRIDLDSPSGLHIPGLGGDLPDAAIVRGIAAGSFEQITLRLDVLHTLAEFGIPVLNTASAIERTVDKARTSLLLRHRRVPTPRAWACEDLAQARHLSAQAQREKRELVLKPLFGCQGQGIIRIGKPADLEACEPTGGLYYLQEFIRPAQPNIWQDWRVFVIGHRPIAAMVRRGQGWITNVARGAQYFPAPLEREIGALACQATQAVAVDYGGVDIIQTPAQGFQVLEVNSIPSWKALQQTTEVNIAGALAKNLLERLHSSYFAHSGSSQKI GT:EXON 1|1-307:0| BL:SWS:NREP 1 BL:SWS:REP 60->290|MPTN_METMP|2e-32|36.5|222/292| BL:PDB:NREP 1 BL:PDB:REP 83->287|1uc9B|8e-10|30.9|178/253| RP:PDB:NREP 1 RP:PDB:REP 60->270|1a9xA|7e-19|16.3|208/1058| RP:PFM:NREP 1 RP:PFM:REP 102->273|PF08443|7e-17|36.6|164/177|RimK| HM:PFM:NREP 1 HM:PFM:REP 101->287|PF08443|2.8e-30|31.5|181/190|RimK| RP:SCP:NREP 1 RP:SCP:REP 102->290|1eyzA3|6e-16|9.8|183/204|d.142.1.2| HM:SCP:REP 101->294|1gsaA2|4.2e-37|34.3|178/192|d.142.1.1|1/1|Glutathione synthetase ATP-binding domain-like| OP:NHOMO 346 OP:NHOMOORG 278 OP:PATTERN 1112112222222222-444343-2--11122---11211112-111112212-121-1-----1-22 ----1--1---------------------------------------1--------1--------------------------------------------------1----------------------------11111---12-11-111----1-----1------1------------11111----------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------2----------1-----------------------11111111-----------------1111-------1--------------1---------------------------------1-----------------------2--------1---------11-------1-----111-----------------1--11--11-----------1-112111----------------------1---11111--11-1112322221213333231-3-----2111------1111-1-1111111111-111111111111111111111111---111111111111111111111111-----------------1111111111112--111-11111111111----------1111111111111111111---------211121111111111---1-11111--------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------2----------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 295 STR:RPRED 96.1 SQ:SECSTR cEEEEEEccTTccHHHHHTTcEEcccEccccTTcccTTcEEEEEcccTTTcEEEEEcccEEEccccHHHHHHHHHHHHHTTHHHHHTcEEcccHHHHHHHHcHHHHHHHHHHTTcccccEEEEccHHHHHcHHHHHHHHcccEEEEETTccTTTTcEEEccHHHHHHHHcTTccEEEEEccTTcEEEEEEEEEcTTccEEEEEEEEEcccTTccGGGccEEEcccccHHHHHHHHHHHHHHHTcccEEEEEEcTTTccEEEEEEEccccHcTTcHHTTccHHHHHHHHHHHHcHH############ DISOP:02AL 297-307| PSIPRED cEEEEEEEccccHHHHHHHHHHHHcccEEEEEEcccEEEEccccccEEEEccccccccEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHHccccEEEEEccccccccEEEEccHHHHHHHHHccccEEEEEccccccccccEEEEEEEEccEEEEEEEEcccccEEEEccccEEEcccccHHHHHHHHHHHHHHcccEEEEEEEEEcccEEEEEEEcccHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccc //