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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56798.1
DDBJ      :             Transketolase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  856/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
c.36.1c.48.1
:606 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->533 1gpuA PDBj 3e-33 29.3 %
:RPS:PDB   5->605 2e6kA PDBj 1e-73 23.8 %
:RPS:SCOP  8->266 1ay0A1  c.36.1.10 * 5e-55 31.6 %
:RPS:SCOP  300->474 1dtwB1  c.36.1.7 * 4e-30 17.1 %
:RPS:SCOP  474->606 1dtwB2  c.48.1.2 * 3e-20 16.8 %
:HMM:SCOP  2->304 1r9jA2 c.36.1.10 * 2e-77 35.2 %
:HMM:SCOP  281->469 1qgdA1 c.36.1.6 * 5.7e-48 38.9 %
:HMM:SCOP  467->605 1qgdA3 c.48.1.1 * 3.2e-27 33.3 %
:RPS:PFM   9->256 PF00456 * Transketolase_N 2e-41 42.0 %
:RPS:PFM   304->462 PF02779 * Transket_pyr 5e-12 34.6 %
:RPS:PFM   492->594 PF02780 * Transketolase_C 7e-14 41.2 %
:HMM:PFM   6->267 PF00456 * Transketolase_N 4.5e-70 38.7 261/333  
:HMM:PFM   302->466 PF02779 * Transket_pyr 2.8e-34 26.5 162/178  
:HMM:PFM   485->597 PF02780 * Transketolase_C 9.4e-29 33.9 112/124  
:BLT:SWISS 2->605 TKT_MOUSE e-153 47.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56798.1 GT:GENE ABA56798.1 GT:PRODUCT Transketolase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(295857..297677) GB:FROM 295857 GB:TO 297677 GB:DIRECTION - GB:PRODUCT Transketolase GB:PROTEIN_ID ABA56798.1 GB:DB_XREF GI:76882117 InterPro:IPR005474 InterPro:IPR005475 InterPro:IPR005476 LENGTH 606 SQ:AASEQ MMKSLQNTAQQLRRLVIRMTTEAGSGHPTSCLSCAEIVAALFFHEMRWDPSDPKARNVDTFILSKGHAAPILWAALWEAKAIHEDPLSLRKLDSSLEGHPTPNNPWVKVATGSLGQGLAAANGIALANRLDGIDARIYCLLGDGECSEGSVWEAAQFASLNHLSNLVAIVDVNALAQSGPAPYQHDIEVFSRRFQSFGWETITIDGHDLGAILSALEQAKKTGPTAIIAKTEKGKGVSFLEGKEGWHGKPLSQEEMEKALAELGEDQAVAPLEPRRVGHYTPPPQQKKPTPALAVDYALGDQAATRDGFGNALKKLGELLPELVVLDGDVKNSTRTEYFAEAYPDRFFESYIAEQNMAGTALGLAAYGKIACATSFACFLSRAYDFIRMAGHSRPSHLIFCGSHAGVSIGKDGPSQMGLEDLAMFRAVSGSTILYPCDGVSAERLTQQVTKAQGIVYIRTTRGKTPVIYANDEEFPVGGSKTLCASKEDKFTIIAAGITVHEALAAYEELKSKEILVRIIDAYSIKPLDQETLAKAAHETQGIITVEDHWIDGGLGDAVAATVSALAPVHRLAITAEPRSGKPEELLERYGISQQAITRKILELMD GT:EXON 1|1-606:0| BL:SWS:NREP 1 BL:SWS:REP 2->605|TKT_MOUSE|e-153|47.5|602/623| SEG 114->127|lgqglaaangiala| SEG 281->291|tpppqqkkptp| BL:PDB:NREP 1 BL:PDB:REP 12->533|1gpuA|3e-33|29.3|516/678| RP:PDB:NREP 1 RP:PDB:REP 5->605|2e6kA|1e-73|23.8|580/632| RP:PFM:NREP 3 RP:PFM:REP 9->256|PF00456|2e-41|42.0|245/275|Transketolase_N| RP:PFM:REP 304->462|PF02779|5e-12|34.6|156/172|Transket_pyr| RP:PFM:REP 492->594|PF02780|7e-14|41.2|102/122|Transketolase_C| HM:PFM:NREP 3 HM:PFM:REP 6->267|PF00456|4.5e-70|38.7|261/333|Transketolase_N| HM:PFM:REP 302->466|PF02779|2.8e-34|26.5|162/178|Transket_pyr| HM:PFM:REP 485->597|PF02780|9.4e-29|33.9|112/124|Transketolase_C| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02780|IPR005476| GO:PFM GO:0008152|"GO:metabolic process"|PF02780|IPR005476| RP:SCP:NREP 3 RP:SCP:REP 8->266|1ay0A1|5e-55|31.6|256/335|c.36.1.10| RP:SCP:REP 300->474|1dtwB1|4e-30|17.1|175/188|c.36.1.7| RP:SCP:REP 474->606|1dtwB2|3e-20|16.8|131/138|c.48.1.2| HM:SCP:REP 2->304|1r9jA2|2e-77|35.2|301/0|c.36.1.10|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 281->469|1qgdA1|5.7e-48|38.9|185/195|c.36.1.6|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 467->605|1qgdA3|3.2e-27|33.3|132/136|c.48.1.1|1/1|TK C-terminal domain-like| OP:NHOMO 2886 OP:NHOMOORG 1081 OP:PATTERN 22-2--2223232232-122222------2-----22222222-----------22-222-222--22 2262522222221222233-322235323332211143632224313122228462222222424356541-111---633312223322241211--22333533361622222222112222234234434354111112231423332252222122212222333324232242222222212222122344444344344444443442344123232224666442321111111111111111111-21----2--223112--2-1111--3331133-114333344343411111111-111-11111133323233B333333363725333333225114253333333333335323134151222222222327782243533622222222225-5565685544214442465554562A322323225632244444444442234441111111111---------------11113222244222186626444444556444443422534332222263222445244223222223222222222332214242322-262222577555643113122222223222222222111111132212332292222222212111223111221122232-1432221111153544733334344433-3333344333343333337898532227555555555555555323233332244244444444422221111111112223222244222222222344444222225233332245222442442222222222133333333333433222222222222222263222255--------221----1---11111-11112-1-1112412226242322 11--211-1--112222121231323411111111111111111111122233322111111113111111223122-221--11111-1322222545211132311312453421222223233253Gc3-43433234225-2233232141112211-11212422711312322I1112195772642321111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 606 STR:RPRED 100.0 SQ:SECSTR GHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHTTcccTTcTTcTTccEEEEccGGGHHHHHHHHHTTccccHHHHTTTcTTcccccccccTTTTcccccccTTHHHHHHHHHHHHHHHccccccEEEEEcHHHHHcHHHHHHHHHHHHTTcTTEEEEEEEccEETTEEGGGTccccTHHHHHHHTTcEEEEEcTTcHHHHHHHHHHHHHcccEEEEEEccTTTTcTTTTTcGGGTccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHTTccccccccHHHHHHHHHHHHGGGcTTEEEEEcccHHHHTccccTTcTTccEEEccccHHHHHHHHHHHHHcccEEEEEEEGGGGGGGGHHHHHHHHHTccccEEEEEcccGGGcTTcTTTccccHHHHHTHTTTcEEEccccHHHHHHHHHHHHcccccEEEEccccccccccHHHHGGGGGccEEEEccccccEEEEEcTTHHHHHHHHHHHHHHTTccEEEEEcccHHHHHcHHHHHHHccTTccEEEEcccccTTGGGTccEHHHHHHGGEEEccccccccccTTHHHHHTTccHHHHHHHHHTTcT DISOP:02AL 96-97| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHcccHHHHHHHcccccccccccccccccEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHcccccEEEEEEccccEEcccccccccHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHccccEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEEcccccEEEEEEcHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHcccHHHHHHHHHHHHc //