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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56808.1
DDBJ      :             periplasmic or secreted lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  148/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:103 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   42->102 PF04972 * BON 3e-09 47.5 %
:HMM:PFM   41->103 PF04972 * BON 2e-23 50.8 63/64  
:BLT:SWISS 25->103 OSMY_ECOLI 2e-14 40.5 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56808.1 GT:GENE ABA56808.1 GT:PRODUCT periplasmic or secreted lipoprotein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 307626..307937 GB:FROM 307626 GB:TO 307937 GB:DIRECTION + GB:PRODUCT periplasmic or secreted lipoprotein GB:PROTEIN_ID ABA56808.1 GB:DB_XREF GI:76882127 InterPro:IPR007055 LENGTH 103 SQ:AASEQ MKNPIKYIGFMLIVFMAVLMLGCADSPKQSAGGYVDDAWITSKVKSSLLSDPLVSGTDVEVNTYQGVVQLSGFVATEEQSEEAERITRSIKGVKDVENKITVK GT:EXON 1|1-103:0| BL:SWS:NREP 1 BL:SWS:REP 25->103|OSMY_ECOLI|2e-14|40.5|79/201| TM:NTM 1 TM:REGION 2->23| RP:PFM:NREP 1 RP:PFM:REP 42->102|PF04972|3e-09|47.5|61/64|BON| HM:PFM:NREP 1 HM:PFM:REP 41->103|PF04972|2e-23|50.8|63/64|BON| OP:NHOMO 181 OP:NHOMOORG 148 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------2-------1-----------11112123--12-11-3---------132-12--2---2--------111---1--------1----------------------1------1-----1------1-------2-1--2-----11--------11111121111111111-11111111111111111112221111111111111111111112-111111--222222222222--1------1111------------------------------1-1111--1111-11-111-------------------1----1111111111------1------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 24-35| PSIPRED cccHHHHHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHHHHHHHHHcccccccEEEEEEEccEEEEEEEEccHHHHHHHHHHHHcccccEEEEEEEEEc //