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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56840.1
DDBJ      :             type II secretion system protein E
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  657/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.52.10
:571 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   181->565 1p9rA PDBj 2e-75 46.1 %
:RPS:PDB   44->237 3d1tA PDBj 9e-34 7.3 %
:RPS:PDB   217->329 3cjtB PDBj 1e-25 15.7 %
:RPS:PDB   347->526 1dmaB PDBj 2e-44 11.4 %
:RPS:SCOP  84->146 2bh1X1  d.52.10.1 * 3e-14 9.5 %
:RPS:SCOP  181->569 1p9rA  c.37.1.11 * e-124 45.7 %
:HMM:SCOP  184->569 1p9rA_ c.37.1.11 * 6.3e-105 37.5 %
:RPS:PFM   46->145 PF05157 * GSPII_E_N 6e-13 33.0 %
:RPS:PFM   195->458 PF00437 * GSPII_E 4e-51 50.6 %
:HMM:PFM   184->461 PF00437 * GSPII_E 2.7e-89 40.3 268/282  
:HMM:PFM   46->151 PF05157 * GSPII_E_N 1.1e-22 29.2 106/109  
:BLT:SWISS 8->571 PILB_PSEAE 0.0 61.7 %
:PROS 389->403|PS00662|T2SP_E

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56840.1 GT:GENE ABA56840.1 GT:PRODUCT type II secretion system protein E GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(338120..339835) GB:FROM 338120 GB:TO 339835 GB:DIRECTION - GB:PRODUCT type II secretion system protein E GB:PROTEIN_ID ABA56840.1 GB:DB_XREF GI:76882159 InterPro:IPR001482 InterPro:IPR007831 LENGTH 571 SQ:AASEQ MATPGVQIIMSGLVRRLVEDGLLSEANARQAQEHSRKNGTPLVTYLVRQKLLKSLDIGQAASQEFGVPLFDINALDLDYLPKGLVEEKLVRQHQALPLFKRGNRLFVAVADPTNLQALDEIKFHTGINTEAILVEEDKLARMIDRAMEAQDTSLAELNDTALDDLDISGGENEPPENTAESEADDTPVVRFINKVLLDAIHQGASDIHFEPYEKIYRVRYRQDGVLREVATPPVTLAGRLAARLKVMARLDISERRVPQDGRMKMNISKNRAIDFRVNSCPTLFGEKIVLRILDPSSAQMGIEALGYEERQQQIFLETIHRPYGMVLVTGPTGSGKTVSLYTALNILNTADRNISTAEDPAEINLPGINQVNVYPKVGLTFAGALKAFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTLTRLLNMGVASYNIASAVSLIIAQRLARRLCSRCKAPEKISHEVLLEEGFTKTQLETTPTLYKAAGCEHCTKGYKGRVGIYQVMPVSEEMGRIIMAGGNSMELAEQSKKEGVADLRQSGLKKIIDGVTSIEEINRVTKE GT:EXON 1|1-571:0| BL:SWS:NREP 1 BL:SWS:REP 8->571|PILB_PSEAE|0.0|61.7|562/566| PROS 389->403|PS00662|T2SP_E|PDOC00567| BL:PDB:NREP 1 BL:PDB:REP 181->565|1p9rA|2e-75|46.1|360/367| RP:PDB:NREP 3 RP:PDB:REP 44->237|3d1tA|9e-34|7.3|193/236| RP:PDB:REP 217->329|3cjtB|1e-25|15.7|108/126| RP:PDB:REP 347->526|1dmaB|2e-44|11.4|176/189| RP:PFM:NREP 2 RP:PFM:REP 46->145|PF05157|6e-13|33.0|100/107|GSPII_E_N| RP:PFM:REP 195->458|PF00437|4e-51|50.6|255/273|GSPII_E| HM:PFM:NREP 2 HM:PFM:REP 184->461|PF00437|2.7e-89|40.3|268/282|GSPII_E| HM:PFM:REP 46->151|PF05157|1.1e-22|29.2|106/109|GSPII_E_N| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF05157|IPR007831| GO:PFM GO:0006810|"GO:transport"|PF05157|IPR007831| GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 2 RP:SCP:REP 84->146|2bh1X1|3e-14|9.5|63/68|d.52.10.1| RP:SCP:REP 181->569|1p9rA|e-124|45.7|374/378|c.37.1.11| HM:SCP:REP 184->569|1p9rA_|6.3e-105|37.5|379/401|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2182 OP:NHOMOORG 714 OP:PATTERN 221--13233333323-1-----22111-1121112222222521113-41-111111121----1-- 153-------------------------------------5---3---3----4--------4-----11----------4-345634-------------11---1-21111111111111111--------------1-444--6443443334421233334333333-3--2-23--2-444434423311111111111111-11111112113331133111111-2111111111111111111111111111111111111-11111-1-1111111111111111111111111111111111131111111112222322222323233333333312511-4435336342332222223216581111-----211221---1--1------------112-51---1--1-----1------1122----------1111111111121--2-----------------------------2-111-22--2522246244424432444424282455511867A99667ABA8A659799C524444444542B994977467--53334-BBCE9989A7766985513333111111-111-111123544546655A8546555567555555555555565--34557------32341243333344434-3335355333343433443333433423222222242332322321311111-533333333733--A622222555545831111111111111111555652545256799754677444557672221122123476666656555777777A776664445--2-111111------------------------------------2212222222184 -------------------------------------------------------------------------------------------------------------1------------------------------------------------3----3------1-----------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 565 STR:RPRED 98.9 SQ:SECSTR ######ccHHHHHHHHHHHTTcccHHHHHHHHHHHHHHTccHHEEEcTTcccccHHHHHHHHccccccHHHHHHHHHHcHHHTTccEEEEEEEEEEEEEEEcTTTccEEEEEEEEEEEEEETTEEEEEEEEEEEEEcHHHHHHccccccEEEEEEEEEEEEcccccHHHHHHHHHTTccEEHHHHHHHHHHHccccHHHHHHHHHHHHHcTTEEEEEEEEEEccTTccccEEEEEEEHTTTccHHHHHHTHHHHHTTTcTTEEEEEEETTccccTTcccccccHHHTTTccGGGEEEcccccEEEcTHHHHHHTTccccEEEEEEEccccTTcccHHHHHHHHHHHccccccccccTTcccTccHHHHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHccccccTTcTTccEEEcccHHHHTTccccccEEEEEEEEETTGEEEccccTTcHHHHHHHHHHHTccccccccEEEEccccccccEEEHHHTEcHHHHTTcEEcccTTcccccGGGccHHHHHHTccEEETTccEEEcccccccTccccccTTcEEEEccccHHHHHHHHHH DISOP:02AL 1-2, 29-43, 151-164| PSIPRED ccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHcccEEcHHHccccHHHHHcccHHHHHHccEEEEEEEccEEEEEEEccccHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEEEccEEEEcccccccHHHHHHHHHHHHHcccHHHHccccccEEEEEEEcccEEEEEEEEEEcccccEEEEEEcccccccccHHHccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccccEEEEEEccccccccccEEEEEEccccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHcccccEEEcccccccccccccccEEEEEEEEccHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHcc //