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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56845.1
DDBJ      :             Protein of unknown function DUF484
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  164/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:244 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   73->240 3e98B PDBj 4e-15 30.7 %
:RPS:PDB   56->240 3e98A PDBj 1e-19 32.8 %
:RPS:PFM   22->240 PF04340 * DUF484 4e-36 44.5 %
:HMM:PFM   22->241 PF04340 * DUF484 2.2e-52 35.2 216/225  
:BLT:SWISS 22->240 YIGA_SALTY 4e-12 26.2 %
:COIL

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56845.1 GT:GENE ABA56845.1 GT:PRODUCT Protein of unknown function DUF484 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 343008..343742 GB:FROM 343008 GB:TO 343742 GB:DIRECTION + GB:PRODUCT Protein of unknown function DUF484 GB:PROTEIN_ID ABA56845.1 GB:DB_XREF GI:76882164 InterPro:IPR007435 LENGTH 244 SQ:AASEQ MRKKAGEKETRKTPLEEVQEREQSIAKYLQTHPDFFARHPDLLSELTIPHPSGAAISLVERQLALLRGQNRELKRQLRDLIENAMVNDDLSKKVHKLALGVLTAATPQAAIEVLFSSLQTGFDVDVIALRLFFDGKSLPPPAPDHLNVMRVSRNAPELEVFASVLKSPQPICGRLTVEQRDYLFGEEAERAVSCALIPLGEEQRRGMLAMGSQEPNRFRADLGTIFLDYLGVIVERALHRHWPY GT:EXON 1|1-244:0| BL:SWS:NREP 1 BL:SWS:REP 22->240|YIGA_SALTY|4e-12|26.2|214/235| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 56->85| BL:PDB:NREP 1 BL:PDB:REP 73->240|3e98B|4e-15|30.7|153/172| RP:PDB:NREP 1 RP:PDB:REP 56->240|3e98A|1e-19|32.8|174/176| RP:PFM:NREP 1 RP:PFM:REP 22->240|PF04340|4e-36|44.5|211/223|DUF484| HM:PFM:NREP 1 HM:PFM:REP 22->241|PF04340|2.2e-52|35.2|216/225|DUF484| OP:NHOMO 166 OP:NHOMOORG 166 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111111111111111111-11111111111-1-------111111---------------------------------------------------------11---111-11--11111--1-1-11-11111---1111------1--11-1-----------------------1---------1111111111111111111111-------1-1--------------1---------11111---11--------------------1111111111111111111---------11111--------1111111111111111----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 186 STR:RPRED 76.2 SQ:SECSTR ######################################################HcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHTccccEEEEEEEcccccEEcHHHHHccccEEEcHHHHHHHHHHHHTTccccTTcccHHHHHHHcccTTGGGcEEEEEEEEcccEEEEEEEEEccTTGGGcTTTTHHHHHHHHHHHHHGGG#### DISOP:02AL 1-21| PSIPRED cccccccHHHHHcccccccccHHHHHHHHHHccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccHHHHcccccccHHHHHHHHHHHcccccEEcccccccHHHHccccccHHHHHHHHcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccc //