[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56847.1
DDBJ      :             response regulator receiver modulated diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  683/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
a.211.1c.23.1d.58.29
:661 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->198 3hc1A PDBj 6e-13 24.2 %
:BLT:PDB   324->631 1w25A PDBj 2e-34 31.8 %
:RPS:PDB   316->637 3breB PDBj 1e-52 29.8 %
:RPS:SCOP  10->231 1vqrA  a.211.1.3 * 2e-27 18.9 %
:RPS:SCOP  321->433 1a0oA  c.23.1.1 * 6e-18 19.5 %
:RPS:SCOP  478->638 1w25A3  d.58.29.2 * 7e-43 38.1 %
:HMM:SCOP  10->284 1vqrA_ a.211.1.3 * 2.3e-54 31.4 %
:HMM:SCOP  319->513 1s8nA_ c.23.1.1 * 2.2e-27 29.0 %
:HMM:SCOP  478->637 1w25A3 d.58.29.2 * 5e-58 44.4 %
:RPS:PFM   16->206 PF08668 * HDOD 2e-25 34.4 %
:RPS:PFM   324->433 PF00072 * Response_reg 3e-17 38.9 %
:RPS:PFM   476->629 PF00990 * GGDEF 4e-35 47.4 %
:HMM:PFM   16->212 PF08668 * HDOD 3.3e-56 40.3 196/196  
:HMM:PFM   473->630 PF00990 * GGDEF 8.2e-50 44.3 158/161  
:HMM:PFM   324->435 PF00072 * Response_reg 1.7e-18 29.1 110/112  
:HMM:PFM   221->269 PF05760 * IER 0.00068 34.7 49/300  
:BLT:SWISS 2->199 Y073_TREPA 2e-09 26.5 %
:BLT:SWISS 324->631 PLED_CAUCR 5e-34 31.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56847.1 GT:GENE ABA56847.1 GT:PRODUCT response regulator receiver modulated diguanylate cyclase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 344789..346774 GB:FROM 344789 GB:TO 346774 GB:DIRECTION + GB:PRODUCT response regulator receiver modulated diguanylate cyclase GB:PROTEIN_ID ABA56847.1 GB:DB_XREF GI:76882166 InterPro:IPR000160 InterPro:IPR001789 LENGTH 661 SQ:AASEQ MSFATRFDELKAMGDLPSPSGVALEIMRLTQREETSIQDLARVIQADPALAGRLLKFANSASVGVRRPVVAIEDAVKLLGIAAIRQFVLGISVLSNYSHGRCEGFNYPGFWSHSLATALAAQALASLERVIAPEEAFTCGLLACVGQLGLATIYPDGYTAILLSCSREDEQALLAREQEEFATNHREMTMALLEDWGLPPIHLEGIAASYQPGPGGLEDASRVQRIARQLYFSGHIAKFCVAQAAEQSNRLVNLEELASCFALDKTGLEQLLKKITQAWTKWGRLLAVPTQEVPSLANLKEELQGKMERQISAPEASDFTPLRILLVSDDELNCKRFTGWLESMGHSVNVAREEKEGLSLILENRCQLVIYEHRLPGANSMKFCRSLREMKCGRQIYLIVLTGMVSGGEAIRIFEAGADDHIAKPFNYEVLQARVGGGERLIRLREEAEQEREAVRGYLADLAVANRRLGQMAMTDSLTGLPNRRYAMERMEQAWAEYERNQTPFSCLVMDLDFFKRVNDQYGHEIGDSVLLEIANVFRGSARSSDIICRLGGEEFLVVCPHTVATEAFQVAERLRRAVEEHSWTMLDSTSVLSVSIGLAASSEGMQHWNDLYRLADQALYQAKRNGRNRVCMAPSPNGKDQTVSLVYPARVHENNPRFIF GT:EXON 1|1-661:0| BL:SWS:NREP 2 BL:SWS:REP 2->199|Y073_TREPA|2e-09|26.5|185/513| BL:SWS:REP 324->631|PLED_CAUCR|5e-34|31.8|292/454| SEG 115->127|latalaaqalasl| SEG 434->457|rvgggerlirlreeaeqereavrg| BL:PDB:NREP 2 BL:PDB:REP 9->198|3hc1A|6e-13|24.2|186/296| BL:PDB:REP 324->631|1w25A|2e-34|31.8|292/454| RP:PDB:NREP 1 RP:PDB:REP 316->637|3breB|1e-52|29.8|322/328| RP:PFM:NREP 3 RP:PFM:REP 16->206|PF08668|2e-25|34.4|189/194|HDOD| RP:PFM:REP 324->433|PF00072|3e-17|38.9|108/111|Response_reg| RP:PFM:REP 476->629|PF00990|4e-35|47.4|154/160|GGDEF| HM:PFM:NREP 4 HM:PFM:REP 16->212|PF08668|3.3e-56|40.3|196/196|HDOD| HM:PFM:REP 473->630|PF00990|8.2e-50|44.3|158/161|GGDEF| HM:PFM:REP 324->435|PF00072|1.7e-18|29.1|110/112|Response_reg| HM:PFM:REP 221->269|PF05760|0.00068|34.7|49/300|IER| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 3 RP:SCP:REP 10->231|1vqrA|2e-27|18.9|222/284|a.211.1.3| RP:SCP:REP 321->433|1a0oA|6e-18|19.5|113/128|c.23.1.1| RP:SCP:REP 478->638|1w25A3|7e-43|38.1|160/162|d.58.29.2| HM:SCP:REP 10->284|1vqrA_|2.3e-54|31.4|271/0|a.211.1.3|1/1|HD-domain/PDEase-like| HM:SCP:REP 319->513|1s8nA_|2.2e-27|29.0|186/190|c.23.1.1|1/1|CheY-like| HM:SCP:REP 478->637|1w25A3|5e-58|44.4|160/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 9300 OP:NHOMOORG 694 OP:PATTERN -----------------------------------------------1-------------------- GB25C---1111--35311-1J33-211111-D7777H85CDAQs-------645-----A83-D2J6883----111--B178BK76111--1-----------2--1----------------11111211171CDD9921195nUVJJJ246FF---31-BJ9-GHM4--1---------Q7E549817A2777775672778777-23333777487E2HJ444444BD111111111111111111111-21-------3311-1--1-11-----------------------------------------------5ED7L88888989794H56545595A--7CC8BIHGD685BA633453--D6A6AA5-111137YTVB9IbPNVX4699489789I-YWOTRBTNBU52LSSSZaRYaeIGUG9GA482CD9B68411111111CFF31kCR11111111111111111111111-11111-98GA4AA842JFGGIHE8887EEVZ999939JUUEPGQ-3ONLZKaKOZ13uB8XVcUJaccL-------67GNnv6PWIMKTY9*cQPU1PKQiLVJaU8878A697G776-11111----------TEJOE43fcIbhYsMpTirklmjlqcljjXhecYW*t---EcGn------DGJC4M7EDDDEDDDFC-BEDFE9ADEDCCDDEEDDFDHEEG1118489888888788897D897547A--F45555544555--1T-1-1-GGGHHBuEo---------------9899938-1-HaRRTQYYaZdZWXUUXWb-----2---aQUTSbcaaaeecwwOQQSQSOHIK2212--d2BB77EE11111111619-------------------------C84BA9A989-2- ----1------------------------------------------------------------------------------------------1---------2----------------------------------------------------2----5---------62----------1--8-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 621 STR:RPRED 93.9 SQ:SECSTR ########HHHTccccccccHHHHHHHHHTTcTTccHHHHHHHHTTcHHHHHHHHHHHHcHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc#ccccHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHTTTHHHHHHHHHcHHHHHHHH###HHHHHHcccHHHHHHHcccHHHHHHHHHHHTTc############################HHHHHHHHHHTcHHHHHHHHTTcHHHHHcccccHHHHHHHHHHTTEEEEETTTcccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccTTcEEEEEEcccHHHHHHHHHHTTccTTEEEEEccHHHHHHHHHHHcccEEEEEcccTTccHHHHHHHHHHcTTTTTccEEEEEccccTTHHHHHHHHTccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTccccHHHHHHHHHHHHHHHHHHTccEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcEEEEccccEEEEEEETccHHHHHHHHHHHHHHHHTTccEEccccTEccEEEEEEEEccccccccHHHHHHHHHHHHHHTTTcccEEEcccccccccHHHHHHHHHHHHHHHHccc DISOP:02AL 1-3, 636-651, 655-656| PSIPRED cccccHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHccHHHHHHHHHHHccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEcccEEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHccccccc //