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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56861.1
DDBJ      :             diguanylate cyclase/phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  657/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
c.1.33d.110.3d.58.29f.55.1
:979 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   545->701 1w25A PDBj 3e-21 35.7 %
:BLT:PDB   727->960 3hvbA PDBj 4e-31 31.3 %
:RPS:PDB   57->290 3e4oA PDBj 3e-04 11.6 %
:RPS:PDB   393->968 2btvA PDBj 4e-59 8.0 %
:RPS:SCOP  414->548 2axtC1  f.55.1.1 * 2e-10 8.3 %
:RPS:SCOP  551->709 1w25A3  d.58.29.2 * 4e-40 33.3 %
:RPS:SCOP  727->965 2basA1  c.1.33.1 * 7e-50 18.4 %
:HMM:SCOP  422->535 1ll8A_ d.110.3.5 * 5.7e-15 25.5 %
:HMM:SCOP  551->710 1w25A3 d.58.29.2 * 8.8e-59 43.8 %
:HMM:SCOP  724->959 2basA1 c.1.33.1 * 1.5e-76 45.1 %
:RPS:PFM   432->536 PF08448 * PAS_4 5e-04 26.2 %
:RPS:PFM   548->701 PF00990 * GGDEF 5e-36 47.4 %
:RPS:PFM   726->959 PF00563 * EAL 6e-50 42.7 %
:HMM:PFM   725->959 PF00563 * EAL 8.7e-69 37.5 232/236  
:HMM:PFM   546->702 PF00990 * GGDEF 9e-50 44.6 157/161  
:HMM:PFM   423->508 PF00989 * PAS 3.7e-11 19.5 82/113  
:BLT:SWISS 438->961 Y091_CAUCR 5e-66 35.1 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56861.1 GT:GENE ABA56861.1 GT:PRODUCT diguanylate cyclase/phosphodiesterase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 362415..365354 GB:FROM 362415 GB:TO 365354 GB:DIRECTION + GB:PRODUCT diguanylate cyclase/phosphodiesterase GB:PROTEIN_ID ABA56861.1 GB:DB_XREF GI:76882180 InterPro:IPR000014 InterPro:IPR000160 InterPro:IPR001633 LENGTH 979 SQ:AASEQ MFKSVAFSAKNILMPDPEQTPAPRFLSLKWKAVLVFSLVLVTINISLAGLAYLGLQRQFAQQREQIYLGHIKEIRGLIKTSYQRMEQLADIVPLLRGDRADKNSLAGKIDSIFERHGHLLQIVWGVEIASFYSSENKLLVSWGQQVGTDRILEWVRAANKRERPITGLDCGERCLQYVAVPLLANDERAGVLLLGRSLAEVVLSFRQISGDDIGIMTAVKLPSENATELRRLMPEWGMRMAALTNAERNLLVLRSLSEGHSLAEVASQHVWYHHAGREYEVRLIPINKAGVENREAQLVVISDVTRALADIRLATRRSLLGGLVGLVVSETLLLLLLWKPMARLQRVVLSLPYLAEHAFEKVRARLSHSAQPAWGRDEIDVLNDTAVTLSYQLEALQAEIQDRTRHLAERGDDLARERDFVTGLLNTAQVIILTQDSAGRVTMLNRQGQKITGYGADQITGRPFYELLAGDKVSPELFQQLEELRTGRRGQVRVDTGLQCQNGSQRTISWFHSRLAVHPSSDVVVLSVGHDVTEREQAEQRLAWLADHDPLTELFNRRRFQHEFEQILGASIRYGTQGGLLYFDLDQFKYINDTSGHQAGDALLRMVADKLRQVVRGSDIVARLGGDEFAVVIRECDVESAVRVARKVCTQLSTLEFPARGGNHSISLSIGIALFPLHGATVRDLMANADVAMYQAKEEGRGRWHLFSSDEQVRERMQQRVYWKEQIEQALREDRFLLYFQPVLDIRTHTIGHYEVLLRMYDHRGRIISPAQFIPVAEQSGLIHAIDHLVLRKAIAQQAKLWSQGYHLTLSINLSGRVVDDPELVPILEDLLRTTGVNPSSLMFEVTETAAVADLAAAEGFMHRIKAHGCRFAVDDFGVGFSSFFYLKRLPVDYVKIDGMFVRELAKSHQDQVFVKALSEVAKGLGKKAVAEFVEDAEALALLHEYGVDYAQGHYIGRPTPHIVETPCAEGKVAWSHAQ GT:EXON 1|1-979:0| BL:SWS:NREP 1 BL:SWS:REP 438->961|Y091_CAUCR|5e-66|35.1|504/809| COIL:NAA 35 COIL:NSEG 1 COIL:REGION 382->416| TM:NTM 1 TM:REGION 31->53| SEG 319->337|llgglvglvvsetllllll| SEG 845->859|evtetaavadlaaae| BL:PDB:NREP 2 BL:PDB:REP 545->701|1w25A|3e-21|35.7|157/454| BL:PDB:REP 727->960|3hvbA|4e-31|31.3|233/251| RP:PDB:NREP 2 RP:PDB:REP 57->290|3e4oA|3e-04|11.6|232/250| RP:PDB:REP 393->968|2btvA|4e-59|8.0|526/845| RP:PFM:NREP 3 RP:PFM:REP 432->536|PF08448|5e-04|26.2|103/111|PAS_4| RP:PFM:REP 548->701|PF00990|5e-36|47.4|154/160|GGDEF| RP:PFM:REP 726->959|PF00563|6e-50|42.7|234/236|EAL| HM:PFM:NREP 3 HM:PFM:REP 725->959|PF00563|8.7e-69|37.5|232/236|EAL| HM:PFM:REP 546->702|PF00990|9e-50|44.6|157/161|GGDEF| HM:PFM:REP 423->508|PF00989|3.7e-11|19.5|82/113|PAS| RP:SCP:NREP 3 RP:SCP:REP 414->548|2axtC1|2e-10|8.3|132/447|f.55.1.1| RP:SCP:REP 551->709|1w25A3|4e-40|33.3|159/162|d.58.29.2| RP:SCP:REP 727->965|2basA1|7e-50|18.4|234/257|c.1.33.1| HM:SCP:REP 422->535|1ll8A_|5.7e-15|25.5|110/114|d.110.3.5|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 551->710|1w25A3|8.8e-59|43.8|160/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 724->959|2basA1|1.5e-76|45.1|233/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 10976 OP:NHOMOORG 669 OP:PATTERN --------------------------------------------1-1--1------------------ LB2AE---111---27522-2I44-122222-C6667J64DHCY*-------747-----DB3-G5L6553----1----I27CHP9B--------------------1----------------11111111171CBBA911196rWWJNN233GG---4--FR9-HHM4------------R6F649819C2888886783888888-33333888587H2PO555555BF-1111111111111111111--2---2----33---1-11-11-----------------------------------------------6EBAM8888888A7C4VA97787B68--7FE89LJIE775BB733462--C599DD81111138cXXCAKeVNYc67BA6AB7AAJ-aYQVVBSUBV71MTTVYZQZbfJIZHDKE4B3CGAB9C6--------HHH5-rGa11111111222222222222222121111-BBKC5GFD52MJJKLLH8887HHYfBBBB5ANXYHRLe-3SRPcIfNQf14sA7XXXWObikQ-------99IRou5ISHLKPSDmWMLP1LIMfGNGZR6665E766OAA6----------------YMWXH43peKjnewUudu*wvvvrzgvqpgpmlff**--1FfJk------LQNE6TDPPPNPNPPQM-MPNRPJIOOONNNNOONORQUNKM--1G9DGGHFGGGFGGFGGHDDCA9EG--I67777756777---Z-2-2-LNLMGB*Lu---------------BABBB4A13-LfaadYdjggmdbbcXZbe-----2---eSbaWkkjjijnh**STUVVVSMNR4444--c2DDA8JK1112122281B-------------------------B84BA7A777-1- ----1------------------------------------------------------------------------------------------1--------------------------------------------------------------2----7---------E2----------2--E-----B---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 820 STR:RPRED 83.8 SQ:SECSTR ########################################################HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTcHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEETTccEEEETTT##TcTTccTTccTTcHHHHHHHHHcEEEEEcTTTccEEEEEEEEEEETTEEEEEEEEEEccHHHHHHHHHHTccTTccEEEEccGGGTTccccccHHHHHHHHHTTTTTTccccccccEEEEEcTTccEEEEEccTTcccEEEEEEEEcTTcc#####################################################################################################cHHHHHGGGGccccEEEcccccccEEcccccccEEEEccHHHHHHcccccccTTcHHHHHHHHHHHHHHHHHHHcccccccEEccccccccEEEcEEEEcccEEEETTEEEEcGGGcccccTTcTTTccHHHHHHHHHHHTTccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTEEEccGGGcccGGGGEEEcccccccccHHHHHHcTTTHHHHHHHHHHHHccEEEEEcEEEEccccEEccHHHHHHHTccccccccGGGGGGcHcccHHHHHHHHHHHHHHHTccccEEcccccccccccccGGGccHHHHHHHHHHHHHHccccccccTTTccEEEEEEcccHHHHHHHHHHHHHHHTTcccccccEEccccccTTccGGGGcccTTTcccccccccccEEccccccccccccEEcGGGccccccccEcTTTcccccccHHHHHHHHHHHHccHHHHHHHHTTHHHHHHHHHHHHHHHHTTcccTTTcccHHHHHHHHHHHHHccccccccEEccccTTHHHHHHTcEEEEEEccTTTTTHHHHHHHHHHHHTTTccHHHHH DISOP:02AL 1-5, 410-415, 977-979| PSIPRED ccccHHccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEHHHHHHHHHHHcccccEEEEccHHHcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccEEEHHHHHHHHHHHHHccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEHHHHHHHHHcccHHHHccccHHHHcccccccHHHHHHHHHHHHccccEEEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEEEcHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEccEEEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEEEEEccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHccHHHHHHHHHHHHHcccccccEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccEEEHHHccccccHHHHHHHHHHHHHHHHcc //