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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56865.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  689/915 : Eukaryota  97/199 : Viruses  0/175   --->[See Alignment]
c.104.1c.72.1
:498 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->467 2ax3A PDBj 5e-47 31.4 %
:RPS:PDB   13->490 2ax3A PDBj 4e-86 30.1 %
:RPS:SCOP  15->213 2ax3A2  c.104.1.1 * 6e-52 36.0 %
:RPS:SCOP  234->494 1kyhA  c.72.1.4 * 5e-37 25.0 %
:HMM:SCOP  6->248 1jztA_ c.104.1.1 * 6.4e-69 43.8 %
:HMM:SCOP  221->492 1kyhA_ c.72.1.4 * 1.3e-74 43.9 %
:RPS:PFM   26->190 PF03853 * YjeF_N 8e-31 48.5 %
:RPS:PFM   249->467 PF01256 * Carb_kinase 9e-38 43.4 %
:HMM:PFM   249->487 PF01256 * Carb_kinase 2e-65 38.0 237/242  
:HMM:PFM   25->190 PF03853 * YjeF_N 4.1e-50 43.4 166/173  
:BLT:SWISS 4->450 YJEF_ECOLI 2e-74 38.1 %
:PROS 431->441|PS01050|YJEF_C_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56865.1 GT:GENE ABA56865.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(369158..370654) GB:FROM 369158 GB:TO 370654 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA56865.1 GB:DB_XREF GI:76882184 InterPro:IPR000631 InterPro:IPR004443 LENGTH 498 SQ:AASEQ MAILPLNLYTAAQVRELDRCTIEEFGISGAMLMERAGKASLEQLRKHWPQAQRLVIICGVGNNGGDGYVLARLARKAEMYVSIYQLGDNSKLSTDAQAARQMLLDSGMEILPFQPQVLRAADVVIDAIFGTGLSRGVTGQWADAIEAINTCGQPVFAMDIPSGLHADTGNILGIAIKAQVTATFGGLKQGMFTHLGPDYCGEIAFDSLSIPPEAYHGVTPSARRITLEDHITKLPSRAKAGHKGDYGHVVIIGGERGMPGAARMAGEAAYRVGAGLVSIATREKHASLLNLARPELMCYGVESAEELKPLLNRATTLVIGPGLGQDLWGQTMLAEALNHSHPLVVDADALNLLASQPRQHNRWIITPHPGEASRLLNINIEEIQADRFAAVQALQQRYGGVAVLKGNGSLVCSTNHPLGLCTAGNPGMASGGMGDVLSGTIAGLLAQGLTLNNAAHLGVTIHAMAGDRAAREGGERGLLASDLMEHLRQLANLQQIGP GT:EXON 1|1-498:0| BL:SWS:NREP 1 BL:SWS:REP 4->450|YJEF_ECOLI|2e-74|38.1|444/515| PROS 431->441|PS01050|YJEF_C_2|PDOC00806| SEG 343->354|lvvdadalnlla| SEG 468->480|raareggerglla| BL:PDB:NREP 1 BL:PDB:REP 15->467|2ax3A|5e-47|31.4|442/484| RP:PDB:NREP 1 RP:PDB:REP 13->490|2ax3A|4e-86|30.1|465/484| RP:PFM:NREP 2 RP:PFM:REP 26->190|PF03853|8e-31|48.5|165/173|YjeF_N| RP:PFM:REP 249->467|PF01256|9e-38|43.4|219/244|Carb_kinase| HM:PFM:NREP 2 HM:PFM:REP 249->487|PF01256|2e-65|38.0|237/242|Carb_kinase| HM:PFM:REP 25->190|PF03853|4.1e-50|43.4|166/173|YjeF_N| RP:SCP:NREP 2 RP:SCP:REP 15->213|2ax3A2|6e-52|36.0|197/211|c.104.1.1| RP:SCP:REP 234->494|1kyhA|5e-37|25.0|260/268|c.72.1.4| HM:SCP:REP 6->248|1jztA_|6.4e-69|43.8|226/243|c.104.1.1|1/1|YjeF N-terminal domain-like| HM:SCP:REP 221->492|1kyhA_|1.3e-74|43.9|271/0|c.72.1.4|1/1|Ribokinase-like| OP:NHOMO 930 OP:NHOMOORG 846 OP:PATTERN 111111111111111111111111111111-111111--1---1111111111111111111111--1 111111--111---1--11-1111--1111111111-11-1-----------111111------1-1--11--11---1--11111111111-111---11111111111--------------111111111111111111111111111111111--11--11111111111111111111111111121-1---------------1-11-1---111-111111111--11111111111111111111111111121111122-1--12211--111111-111-1111111111-------------111111111-1--111111111111111111111112211111111111111111111-11121111-----111111111111111111111111-22122111111-11111111111111111111-----11111111111--1111111111111----------------------11111-22221111111111111111111111-111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111-111111-1111111-11111111111111111111---1111------11111111111111111-111111111111111111111111--111-1111111111111111-1111--111111111111---111111122211112---1-1---------11111-111111111111111111111111111111111---11111111-1111121221111111--1111--11--------1---------------------------1111111111111 ----121-311--111222-111-1----11-111--------11-111111-1-21--------1-------1-----------111-2422121111113-11--1--4231-1-1----2-13-11241-11312--4-121-----1-11--1-1--3122-12--3221-----8-----2--12----2--2- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 480 STR:RPRED 96.4 SQ:SECSTR ############ccHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHcccTTcEEEEEcccHHHHHHHHHHHHHTTTccEEEEEEccccccccHHHHHHHHHHHHTTccEEcccGGGGGGccEEEEEcccTTccccccHHHHHHHHHHHHcccEEEEEcccTTccTTTcccccccccccEEEEEccccHHHHcTTHHHHHcEEEEEcccccHHHHTTccEEEccHHHHHHccccccccccccGGGGcEEEEEccccccccHHHHHHHHHHHTTccEEEEEEETTTTHHHHHHcTTcEEEEEccHHHHHHHHHTccEEEEcTTccccHHHHHHHHHHHHHccccEEEcHHHHHTccHHTccccEEEcccHHHHcHHHTccHHHHTTcHHHHHHHHHHHHTcEEEEccccEEEEccccEEEEEccccGccccTTHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHTccccGGGccHHHHHHHHHHHGc###### DISOP:02AL 1-2| PSIPRED ccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHcccEEEcccccccccccEEEEEEEcccccccccHHHHHHHHHHHHccccEEEEEccccccccccccccccccccEEEEHHHHHHHHccccccccccEEEEEEccccHHHHHHcccccccccHHHHHHHccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHEEEEccHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHccccEEEEccHHHHHHHHHcccccEEEcccHHHHHHHcccccccccccHHHHHHHHHHHHccEEEEEcccEEEEEcccEEEEEcccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccc //