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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56874.1
DDBJ      :             Outer membrane lipoprotein carrier protein LolA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  301/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.125.1
:236 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->230 2zpdA PDBj 1e-12 26.5 %
:RPS:PDB   46->231 3buuB PDBj 9e-33 12.6 %
:RPS:SCOP  53->231 1iwlA  b.125.1.1 * 9e-38 26.2 %
:HMM:SCOP  50->235 1iwlA_ b.125.1.1 * 1.3e-46 41.1 %
:RPS:PFM   64->222 PF03548 * LolA 2e-31 42.8 %
:HMM:PFM   61->223 PF03548 * LolA 7.3e-47 39.5 162/165  
:BLT:SWISS 51->230 LOLA_METCA 1e-48 47.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56874.1 GT:GENE ABA56874.1 GT:PRODUCT Outer membrane lipoprotein carrier protein LolA GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 381835..382545 GB:FROM 381835 GB:TO 382545 GB:DIRECTION + GB:PRODUCT Outer membrane lipoprotein carrier protein LolA GB:PROTEIN_ID ABA56874.1 GB:DB_XREF GI:76882193 InterPro:IPR004564 LENGTH 236 SQ:AASEQ MEAGKSWLRRRQRIKEGVFIKNFYRSRLGFQGALLGIILSGLAFTLSAEEPGDHLETFLQKTHSLRAEFQQILLDERNQPLEESKGVFFLQRPGKFRWDYHEPFSQTIVADGEHVWFYDPDLAQVTVKNQGLALGDTPALLLSGKRLPAENFSISNLPSDNHLAWVELRPRDKEAAFERLLLAFDDDGLRQMELHDSFGRTTRLVFSKLEINLSLDPSLFVFTPPPGADVIGGDSP GT:EXON 1|1-236:0| BL:SWS:NREP 1 BL:SWS:REP 51->230|LOLA_METCA|1e-48|47.8|180/208| SEG 32->43|gallgiilsgla| BL:PDB:NREP 1 BL:PDB:REP 55->230|2zpdA|1e-12|26.5|170/183| RP:PDB:NREP 1 RP:PDB:REP 46->231|3buuB|9e-33|12.6|183/214| RP:PFM:NREP 1 RP:PFM:REP 64->222|PF03548|2e-31|42.8|159/166|LolA| HM:PFM:NREP 1 HM:PFM:REP 61->223|PF03548|7.3e-47|39.5|162/165|LolA| GO:PFM:NREP 2 GO:PFM GO:0015031|"GO:protein transport"|PF03548|IPR004564| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF03548|IPR004564| RP:SCP:NREP 1 RP:SCP:REP 53->231|1iwlA|9e-38|26.2|168/177|b.125.1.1| HM:SCP:REP 50->235|1iwlA_|1.3e-46|41.1|180/182|b.125.1.1|1/1|Prokaryotic lipoproteins and lipoprotein localization factors| OP:NHOMO 302 OP:NHOMOORG 301 OP:PATTERN -------------------------------------------------------------------- -1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------1------------------------------1--------------------------------------------1------------------------------------11111111111111111111111111111111111111111111111111111111111111111111111---1-1111-1111----11--11--1-111--------------------------11111-11111111111111111111111111--11111------111111-1111111111-111111111111111111111111111111111111111111111111111--111111111111---1111111111111111-1111111111111111111111111111111111111111111111111111111111111--1--11111111121111--1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 186 STR:RPRED 78.8 SQ:SECSTR #############################################ccHHHHHHHHHHHHcccccEEEEEEEEEEEEcTTcccEEEEEEEEEETTTEEEEEEEcTTTcEEEETTEEEEcTTccccEEEccccEEETTEEHHHHHccccccTTEEEEEEEETTEEEEEEEEEccTTccccEEEEEEETTTEEEEEEEcTTccEEEEEEEEEEEETTEEEEEEEEEccccccEE##### DISOP:02AL 1-8, 75-82, 235-236| PSIPRED ccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEccccEEEEEEEEEEEEccccEEEEEcccccEEEEEEccEEEEEEcccEEEEEEEccccccccccEEEcccccccccEEEEEEEEcccEEEEEEEEccccccEEEEEEEEEcccEEEEEEEEccccEEEEEEEEEEEccccccccEEEEcccccEEEEcccc //