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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56883.1
DDBJ      :             Protein of unknown function UPF0011
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  888/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
c.90.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->112 3hh1B PDBj 6e-26 54.6 %
:BLT:PDB   115->227 3fq6B PDBj 2e-21 48.6 %
:RPS:PDB   3->223 2cbfA PDBj 6e-42 17.4 %
:RPS:SCOP  3->224 1wyzA1  c.90.1.1 * 5e-45 23.9 %
:HMM:SCOP  2->224 1wyzA1 c.90.1.1 * 3.1e-82 57.0 %
:RPS:PFM   5->205 PF00590 * TP_methylase 8e-18 37.7 %
:HMM:PFM   4->202 PF00590 * TP_methylase 5.9e-39 30.9 194/210  
:BLT:SWISS 5->274 Y582_VIBCH 7e-77 50.4 %
:PROS 82->93|PS01296|UPF0011
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56883.1 GT:GENE ABA56883.1 GT:PRODUCT Protein of unknown function UPF0011 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 390752..391597 GB:FROM 390752 GB:TO 391597 GB:DIRECTION + GB:PRODUCT Protein of unknown function UPF0011 GB:PROTEIN_ID ABA56883.1 GB:DB_XREF GI:76882202 InterPro:IPR000878 InterPro:IPR008189 LENGTH 281 SQ:AASEQ MNGTLYVVATPIGNLGDFSPRAQEILRKADLIAAEDTRHSAALLRHFGITTAMISLHEYNERRRAELLIARCREGLSVALISDAGTPLISDPGYRVVRQARHAGIEVLPIPGPCALVAALSVAGLPSDRFVFEGFLPAKTGARQARLLQLAEESRTLIFYEAPRRLLETLQAMIEAFEPDREAVVARELTKRYETVQGGTLSFLLSWARQTPESSRGELVLLVHGAEKEQDAIQQEALRVLRPLVAVLPLKQAVALAVDITGFKKNRLYQLALELQAAKKH GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 5->274|Y582_VIBCH|7e-77|50.4|270/288| PROS 82->93|PS01296|UPF0011|PDOC00998| SEG 237->250|alrvlrplvavlpl| BL:PDB:NREP 2 BL:PDB:REP 3->112|3hh1B|6e-26|54.6|108/111| BL:PDB:REP 115->227|3fq6B|2e-21|48.6|109/114| RP:PDB:NREP 1 RP:PDB:REP 3->223|2cbfA|6e-42|17.4|218/234| RP:PFM:NREP 1 RP:PFM:REP 5->205|PF00590|8e-18|37.7|199/206|TP_methylase| HM:PFM:NREP 1 HM:PFM:REP 4->202|PF00590|5.9e-39|30.9|194/210|TP_methylase| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00590|IPR000878| GO:PFM GO:0008168|"GO:methyltransferase activity"|PF00590|IPR000878| RP:SCP:NREP 1 RP:SCP:REP 3->224|1wyzA1|5e-45|23.9|209/223|c.90.1.1| HM:SCP:REP 2->224|1wyzA1|3.1e-82|57.0|221/0|c.90.1.1|1/1|Tetrapyrrole methylase| OP:NHOMO 1010 OP:NHOMOORG 910 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111112111111111111111--111111111111111111111111111122221222111222222222121111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111-11111111111-1111111111111111111111111111111111111111111----------111111111111111----1111112222222232222222222222222222222222222221211222221222222222222222222222211111111111111111111111111111112111111111111111-11111111111111111111111111111111111111111--11111111--111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222221111111111111111-11111111111111111111111111111111 --------211-------------------------------------------------------------------------------------------------21-----------------------------------------------------------------11111111111212-11------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 235 STR:RPRED 83.6 SQ:SECSTR #ccEEEEEEEEcccTTcccHHHHHHHTTccEEEEEcccccHHHHTTccTTcEEEEEccccHHHHHHHHHHHHHTTccEEEEEcEccTTcccccHHHHHHHHHTTcEEEEEccccHHHHHHHHTTTTcccEEEEEccccccccGGGcHHHHGGGccEEEEETcGGGHHHHHHHHHHTccTTcEEEEEEcTTcTTcEEEEEEGGGHHHHHHHTTTcccccEEEEEEcGGGGGcTTcTT############################################# DISOP:02AL 277-281| PSIPRED ccEEEEEEEcccccHHHccHHHHHHHHHccEEEEEccccHHHHHHHccccccEEEcccccHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHcccccEEHHHHHccccccEEEEccHHHHHHHHHHccccccccEEEEEcccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcc //