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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56902.1
DDBJ      :             response regulator receiver modulated diguanylate cyclase/phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  597/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.1.33c.23.1d.110.3d.58.29f.55.1
:696 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   269->430 3hvaA PDBj 2e-23 32.1 %
:BLT:PDB   451->695 3hv9A PDBj 9e-52 42.4 %
:RPS:PDB   8->125 1dz3A PDBj 5e-08 11.9 %
:RPS:PDB   116->680 2btvA PDBj 1e-44 8.1 %
:RPS:SCOP  9->141 1a04A2  c.23.1.1 * 4e-09 12.9 %
:RPS:SCOP  134->272 2axtC1  f.55.1.1 * 1e-13 5.8 %
:RPS:SCOP  275->433 1w25A3  d.58.29.2 * 8e-24 22.6 %
:RPS:SCOP  453->684 2basA1  c.1.33.1 * 7e-38 23.0 %
:HMM:SCOP  2->138 1k66A_ c.23.1.1 * 4.8e-09 22.8 %
:HMM:SCOP  131->257 1ew0A_ d.110.3.2 * 1.2e-16 32.5 %
:HMM:SCOP  275->433 1w25A3 d.58.29.2 * 1.3e-36 32.7 %
:HMM:SCOP  448->684 2basA1 c.1.33.1 * 2.5e-56 37.8 %
:RPS:PFM   37->145 PF10345 * Cohesin_load 3e-04 24.8 %
:RPS:PFM   273->426 PF00990 * GGDEF 7e-18 31.8 %
:RPS:PFM   450->684 PF00563 * EAL 8e-33 35.5 %
:HMM:PFM   449->684 PF00563 * EAL 4e-57 35.8 232/236  
:HMM:PFM   272->427 PF00990 * GGDEF 3.7e-26 29.5 156/161  
:HMM:PFM   10->114 PF00072 * Response_reg 2.6e-09 23.3 103/112  
:HMM:PFM   147->221 PF00989 * PAS 3.7e-08 31.1 74/113  
:BLT:SWISS 133->678 Y3085_AZOC5 3e-35 26.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56902.1 GT:GENE ABA56902.1 GT:PRODUCT response regulator receiver modulated diguanylate cyclase/phosphodiesterase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 412858..414948 GB:FROM 412858 GB:TO 414948 GB:DIRECTION + GB:PRODUCT response regulator receiver modulated diguanylate cyclase/phosphodiesterase GB:PROTEIN_ID ABA56902.1 GB:DB_XREF GI:76882221 InterPro:IPR000014 InterPro:IPR000160 InterPro:IPR001633 InterPro:IPR001789 LENGTH 696 SQ:AASEQ MLSSKNIVRLLIVDASFEDAEMVTNLLRKMGFAARASRVEKEEEFREAIEGQSWDIIVCAAMLPQFSVARAAQILLQSEKDISLIIVVDEKTDSDDIDEMYVAGVRDVVLKSRPLRLQSVIKRELQDLENRRARRHSEMVLGESERQVRALLESSRDAVGYVHEGMHIYANRAYLELFGYHELDEIEGMPLLDMIAPEEHNRFKAFLKEYGASEGKSAHFTLRAHKADGHTFTAAWEFTPASIEGEFCTQIVIRDKTYDLAAEERIKQVQQRDILTGFFSRPHYLELMEKWVIAARAGDRESSLLYIAIDQFNRVRARVGIGASDLVVVDVARILQQYCDEKVILARFGDEVFTLLLPHGSDEQEDALAEQLRQAVDRHLVEMDERSINVTCSIGICRIGESAPGGQQILERAHKACLKAQEAGGNRIERYRPVIEDLTDQEKIKQWEVQLREAMNNKDGFCLFYQPIVSLHGETEEIFEVLLRMTDDAGGYILPEKFLEPAAQLKLMGEIDRWVIAKAMSVLHSRHQVGQLIRFFVKLSDPSIHDKNLLPWLKKHLQESGLDARSLIFEISESSALNYLKRVQQLVEGLRVLGCQFALEHVGTGLDTSNCLKHINVDYLKIDGAFIENLLQDEQNQEAVKIIIEMAKEAGKPTIAEFVSDANTLALLWQFGLDYAQGRYIQEPNQFLSYEFSGGI GT:EXON 1|1-696:0| BL:SWS:NREP 1 BL:SWS:REP 133->678|Y3085_AZOC5|3e-35|26.0|524/735| BL:PDB:NREP 2 BL:PDB:REP 269->430|3hvaA|2e-23|32.1|162/162| BL:PDB:REP 451->695|3hv9A|9e-52|42.4|243/261| RP:PDB:NREP 2 RP:PDB:REP 8->125|1dz3A|5e-08|11.9|118/123| RP:PDB:REP 116->680|2btvA|1e-44|8.1|516/845| RP:PFM:NREP 3 RP:PFM:REP 37->145|PF10345|3e-04|24.8|105/580|Cohesin_load| RP:PFM:REP 273->426|PF00990|7e-18|31.8|154/160|GGDEF| RP:PFM:REP 450->684|PF00563|8e-33|35.5|234/236|EAL| HM:PFM:NREP 4 HM:PFM:REP 449->684|PF00563|4e-57|35.8|232/236|EAL| HM:PFM:REP 272->427|PF00990|3.7e-26|29.5|156/161|GGDEF| HM:PFM:REP 10->114|PF00072|2.6e-09|23.3|103/112|Response_reg| HM:PFM:REP 147->221|PF00989|3.7e-08|31.1|74/113|PAS| RP:SCP:NREP 4 RP:SCP:REP 9->141|1a04A2|4e-09|12.9|132/138|c.23.1.1| RP:SCP:REP 134->272|2axtC1|1e-13|5.8|137/447|f.55.1.1| RP:SCP:REP 275->433|1w25A3|8e-24|22.6|159/162|d.58.29.2| RP:SCP:REP 453->684|2basA1|7e-38|23.0|222/257|c.1.33.1| HM:SCP:REP 2->138|1k66A_|4.8e-09|22.8|136/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 131->257|1ew0A_|1.2e-16|32.5|126/130|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 275->433|1w25A3|1.3e-36|32.7|159/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 448->684|2basA1|2.5e-56|37.8|233/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 6389 OP:NHOMOORG 605 OP:PATTERN -----------------------1--------------------1--1-------------------- C3-26---111----3322-2822-122222-34442332A678S-------335-----762-6284442----1----7-66DM89--------------------1----------------11-1111-11-67734---72aNIDDD222AA---3--9G6-77E3------------F14--1--49-888886793989889-21122998443A1ED1----289--------------------------1---------------------------------------------------------------4686G33333336383J465344624--46674768432217121331--82458851111125RJG658IFBHM5566566465A-KIHHE8DL8G31GHHGMQLRRRHDF89AA2818A56764--------A994-T8K111-----11112222122222111---1-8AA83A77229676887666566LO7777469GL8EDK--EDARBMCEH14d75IILGGTXOF-------67ENbY3BE79DBJ5IHGDG-GCDRDGBOI11216532C5541---------------PEHRF43PLDSXQcHVMgVXWWYRgNXXVSRQOMSSW--1DRBW------CFA73H7IIIHIHJJHG-FIGIHEEHHHGIGGHHHIHDFBB9---C98BACBCCDBCCBBC7CB577AA--B45555534555---N-1-1-EGEGE5fCR---------------455551413-BTPPQOPRRMPLOLPLMPQ-----2---NBHHELLLLKSSOWWFEFFGFFFFH3333--O199429911111111313-------------------------11133------1- -------------------------------------------------------------------------------------------------------------------------------------------------------------------5---------8-----------1--7-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 695 STR:RPRED 99.9 SQ:SECSTR ccccEEEEcEEEEEccHHHHHHHHHHHHHTTcEEcEEEEEccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHTTccEEEEEccTTccccTTccHHHHHHHHHHHTTcHHHHHHHGGGGccccEEEcccccccEEEcccccccEEEEccHHHHHHcccccccTTcHHHHHHHHHHHHHHHHHHHcEEEEcccEEEETTEEEEcGGGcccccTTcTTTccHHHHHHHHHHHTTccccccccccccEEEEEccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTEEEccGGGcccGGGGEEEcccccccccHHHHHHcTTTHHHHHHHHHHHHccEEEEEcccHccccHHHHHHHHHHHHTccccccccGGGGGGcccHcHHHHHHHHHHHHHHHTccccEEccccHHHHHHcccGGGccHHHHHHHHHHHHGHHccccccccccTccEEEEEEEEcHHHHHHHHHHHHHHHTTcccccccEEccccccTTccEETTTTEEGGGGcccccccccEEccccccccccccEEcGGGcccccccccTTTcccccccHHHHHHHHHHHHHccHHHHHHHHTTHHHHHHHHHHHHHHHHTTcTccTTcccHHHHHHHHHHHHHccccccccEEccccTTHHHHHHTcEEEEEEccTTTTcccccccccccccc# DISOP:02AL 1-4| PSIPRED ccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEcHHHHHHHccccHHHHccccHHHHcccccHHHHHHHHHHHHHccccEEEEEEEEEccccEEEEEEEEEEEEEccccEEEEEEEEEHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEEEEEccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHccHHHHHHHHHHHHHcccccccEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccEEEHHHccccccHHHHHHHccc //