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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56916.1
DDBJ      :             NAD-dependent epimerase/dehydratase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  331/915 : Eukaryota  155/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:320 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->165 2a35B PDBj 1e-10 33.3 %
:RPS:PDB   5->265 3c1oA PDBj 4e-26 13.3 %
:RPS:SCOP  2->241 1xq6A  c.2.1.2 * 1e-21 19.4 %
:HMM:SCOP  1->228 2fmuA1 c.2.1.2 * 5.9e-51 32.6 %
:RPS:PFM   6->246 PF05368 * NmrA 3e-13 32.4 %
:HMM:PFM   6->209 PF01370 * Epimerase 6.4e-17 27.0 200/238  
:BLT:SWISS 8->295 NDUA9_PANTR 4e-27 30.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56916.1 GT:GENE ABA56916.1 GT:PRODUCT NAD-dependent epimerase/dehydratase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(430928..431890) GB:FROM 430928 GB:TO 431890 GB:DIRECTION - GB:PRODUCT NAD-dependent epimerase/dehydratase GB:PROTEIN_ID ABA56916.1 GB:DB_XREF GI:76882235 InterPro:IPR001509 InterPro:IPR002225 InterPro:IPR005913 InterPro:IPR008030 LENGTH 320 SQ:AASEQ MNIQTVCILGGTGFVGRWLSSHLVEQGYKVRVLTRHWQRHRDLLVLPGLRLMETDVYDPAQLAAQFNGCQSVINLIGILNEKGRNGHGFRQVHADLPEKVAQICLDTGIKRLLHMSALNADANQGASYYLRSKGEGENRVLALARQGLEVTIFQPSVIFGPGDSFFNRFGSLLKLSPFIFPLACPEARLTPVYVGDVARAFARALSDKEDFSQSYELCGPKIYTLKQLVEYTAKVLELKRRVIGLSDKLSRIQASIFEYVPGKPFSKDNYASLQVPSICHRNGLHELGIEPTAIDAIVPGYLGQVSQRSQYLELRRHAQR GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 8->295|NDUA9_PANTR|4e-27|30.6|281/377| BL:PDB:NREP 1 BL:PDB:REP 6->165|2a35B|1e-10|33.3|150/208| RP:PDB:NREP 1 RP:PDB:REP 5->265|3c1oA|4e-26|13.3|248/314| RP:PFM:NREP 1 RP:PFM:REP 6->246|PF05368|3e-13|32.4|219/234|NmrA| HM:PFM:NREP 1 HM:PFM:REP 6->209|PF01370|6.4e-17|27.0|200/238|Epimerase| RP:SCP:NREP 1 RP:SCP:REP 2->241|1xq6A|1e-21|19.4|227/253|c.2.1.2| HM:SCP:REP 1->228|2fmuA1|5.9e-51|32.6|218/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 617 OP:NHOMOORG 497 OP:PATTERN ------------------------21112221-----------------------------1----12 -21-1-1--1-----------1--21------11111-11-11111-----11---------1-1--121-------------11111-----------1--11-11-11---------------31141111--1-----1112-1--1----1-----------1----------------11111---1--------------------------------1------1-----------------11--------------------------------------------------------------1-------------------------------------2------2---------------111221111111111112111111-1111111111-11111211111-21112111112211122112111111111111111111122111111111111--------1------1111122111-1111122222111111111111111211111111111111---211----2221111-------11321122121-11-12111-322211212-----1-3-------------------------11---------------------------------3111----------11-1112122222-121221222112221122-111----1----------------21122211------1----111-------------1-1-1-------------------------1-22111-1-1------11---------1---1--------11----------------1-11--------------------------------------------------11- ----11--11--1121111111111-1111111111-1111111111111111111111111111----1--1-1------11111---11212222122111111-11212111221-1111-1111-161-131--1-11111---1-1112-2111---11111111111112111F111111122--11111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 309 STR:RPRED 96.6 SQ:SECSTR HccEcEEEETTTcTTHHHHHHHHHHTTccEEEEEccccTTccHHHHTTcEEEEccTTcHHHHHHHHTTccEEEEcccGGGHHHccGGGHHHHHHHHHHHHHHHHHHccccEEEcccccccGGGccccHHHHHHHHHHHHHHHHHHHTcccEEEEccEEHHHHHHHHHcccccccTTccEEEETTcccEEEEEcHHHHHHHHHHHHcGGGTTEEEEcccGGGEEEHHHHHHHHHHHHTccccEEEEcHHHHHHHHHHccTTTHHHHHHHTTccTTccccccccHHHHHHHcTTcccHHHTTccccHHTTc########### DISOP:02AL 1-2, 313-315, 317-320| PSIPRED ccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHccccccEEEEEEcccHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccEEEcccHHHHHHHHHHHHHcccEEEEcccccEEccEEHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHccc //