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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56950.1
DDBJ      :             Glycosyl hydrolase, BNR repeat
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.68.1b.69.13
:647 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   290->380 2cn3A PDBj 2e-05 34.5 %
:RPS:PDB   231->400 3a0fA PDBj 2e-10 19.9 %
:RPS:SCOP  330->413 1sntA  b.68.1.1 * 5e-05 14.3 %
:HMM:SCOP  278->445 1sqjA2 b.69.13.1 * 2.6e-15 28.1 %
:BLT:SWISS 278->389 P2SAF_CYAPA 1e-04 38.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56950.1 GT:GENE ABA56950.1 GT:PRODUCT Glycosyl hydrolase, BNR repeat GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 465199..467142 GB:FROM 465199 GB:TO 467142 GB:DIRECTION + GB:PRODUCT Glycosyl hydrolase, BNR repeat GB:PROTEIN_ID ABA56950.1 GB:DB_XREF GI:76882269 InterPro:IPR002860 LENGTH 647 SQ:AASEQ MRYVWIVLLLVATFGTASYGGKSAIHTEEVDPSVLPPIYVDEDEWGNLFRTSLTFDPESGTYTIEEVYLDEADIAELRAEGFRIGISPAEPSTTQAAPWRPLCPEEVSCVEPQIFMTPGRSELLPPALAPLVRTDSVWLQYSDKFKFEPYQNRPRGIFRLHPPQTALEILLPLKDSPLETPNPDPDSSDVDEVFDPPNIQPTYLNVSDFNAIEAEDGSTLVFGLYGMFRLSPEGELIDALNWAGRSIVGLNNAAFTGPPVRVQDSLFVGIRGAGGQYIYHSEDDGLTWQEQLASHRLGDDRYNLVANPEGTGLWAITSEFFDRPAELRESLDLGATWQRVDDGSFPAHTVRVAHDPGDPQVAYALSGQGLYRSEDRGVSWHLTALQEPVHGLAFVPQEAPLPPLLVAGTDTGVKVTPAPFSDWKAWKPLSNGLLAIPHTVVYTDGLLIGVSAAGYFVCPQTDCFGEGQVVPAEEARGEAKVTEFFNVDLGHYFMTASPEDVATIEAGGAGPGWERTGHTFQAWSLLGSNVGVYLCRFYGSVSPGPNSHFFTPSPQECGLLLDLQAQTPPTAPRWNFEGYAFMAIPAQGKGEAQHCPEAFAPVYRAYNNGFARGEESNHRFVTDRTLLTPLVAGGWVEEGIAFCVPPQ GT:EXON 1|1-647:0| BL:SWS:NREP 1 BL:SWS:REP 278->389|P2SAF_CYAPA|1e-04|38.3|94/100| BL:PDB:NREP 1 BL:PDB:REP 290->380|2cn3A|2e-05|34.5|84/728| RP:PDB:NREP 1 RP:PDB:REP 231->400|3a0fA|2e-10|19.9|156/753| RP:SCP:NREP 1 RP:SCP:REP 330->413|1sntA|5e-05|14.3|84/352|b.68.1.1| HM:SCP:REP 278->445|1sqjA2|2.6e-15|28.1|160/0|b.69.13.1|1/1|Oligoxyloglucan reducing end-specific cellobiohydrolase| OP:NHOMO 4 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------3----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 182 STR:RPRED 28.1 SQ:SECSTR ######################################################################################################################################################################################################################################cccccEEEEEEEETTE#########EEEEEEEEEcccccTTccccTTEEEEccTTcccEEccTTccTTcccEEEEcTTcccEEEEcccccTTcccccEEEccTTccccccccTccccccccEEEccccTTcEEEEETTEEEEEccTTcccEEEccTccccccccEEEEEccTTcEEEEccTTcEcccccTT################################################################################################################################################################################################################################## DISOP:02AL 178-187| PSIPRED cHHHHHHHHHHHHcccccccccccEEcccccccccccEEEcccccccEEEEEEEEccccccEEEEEEEEcccHHHHHccccEEEEcccccccccccccccccccccHHHcccEEEEccccHHcccHHHHHHEEccEEEEEEcccEEccccccccccEEEEcccHHEEEEEEEcccccccccccccccccHHHHcccccccEEEEEcccccEEEcccccEEEEEEEEEEEEcccccEEHHHcccccEEEEcccccccccHHHEEEEEEEEEEcccccEEEEcccccccHHHHEEcccccccccEEEEcccccEEEEEcccccccccEEEEEcccccHHHHHHcccccccEEEEEEEcccccEEEEEEcccEEEEEccccEEEEEEcccccccEEEEEEccccccEEEEEccccEEEEccccccHHHHcHHccccccccEEEEEEccEEEEEEccEEEEcccccccccccEEccccccccccEEEEEccccccEEEcccccEEEEEEccccccccccccEEEEEEEEccccccEEEEEEEEcccccccccEEcccHHHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccccccEEEEEccccccccccccEEEEcHHHHHHHHHcccccccEEEEEccc //