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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56963.1
DDBJ      :             Type I restriction-modification system M subunit
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  477/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:534 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   180->464 2okcB PDBj 8e-18 30.0 %
:RPS:PDB   113->529 2ar0A PDBj 4e-31 15.5 %
:RPS:SCOP  183->529 2ar0A1  c.66.1.45 * 2e-31 19.8 %
:HMM:SCOP  7->530 2ar0A1 c.66.1.45 * 4.9e-126 41.6 %
:RPS:PFM   9->152 PF12161 * HsdM_N 7e-21 50.9 %
:RPS:PFM   180->447 PF02384 * N6_Mtase 1e-58 52.4 %
:HMM:PFM   179->494 PF02384 * N6_Mtase 4.6e-107 48.1 297/311  
:HMM:PFM   9->168 PF12161 * HsdM_N 3.9e-27 27.5 131/132  
:BLT:SWISS 4->511 T1MD_MYCPN 1e-84 41.4 %
:PROS 318->324|PS00092|N6_MTASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56963.1 GT:GENE ABA56963.1 GT:PRODUCT Type I restriction-modification system M subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(476041..477645) GB:FROM 476041 GB:TO 477645 GB:DIRECTION - GB:PRODUCT Type I restriction-modification system M subunit GB:PROTEIN_ID ABA56963.1 GB:DB_XREF GI:76882282 InterPro:IPR000051 InterPro:IPR002052 InterPro:IPR002296 InterPro:IPR003356 InterPro:IPR004546 LENGTH 534 SQ:AASEQ MTRDQLSQLGKTLWAIADDLRGAMNADDFRDYMLSFLFLRYLSDNYEAAAKKELGPDYPKLADDDRRAPLAVWYEDNAEDVAAFEKQMRRKMHYVIHPDYLWSSIAELARTQDEELLQTLAGGFKHIENESFASTFQGLFSEINLRSEKLGRTLADQNRKLCTIITKIAKGIARFSTGSDILGDAYEYLIGQFAAGSGKKAGEFYTPQSVSTILSRIVTLDSQEPSTGKKKKLNRVLDFACGSGSLLLNVRNQMGPRGIGMIYGQEKNITTYNLARMNMLLHGMKDTEFQIHHGDTLENDWAILNERNPAKKLQCDAVVANPPFSYRWEPDEAMGEDFRFESHGLAPKSAADFAFLLHGLHFLSDEGTMAIVLPHGVLFRGGAEARIRTKLLKDGHIDTVIGLPSNLFFSTGIPVCILVLKKCKKPDDVLFINASEHFEKGKRQNALRPVDIDKIVDTYQYRKEEERYARRVSREEIEKNDDNLNISRYVSTAKPEPEVDLDDVHKKLTAIEQRISQTTETHNQFLKALGLPIL GT:EXON 1|1-534:0| BL:SWS:NREP 1 BL:SWS:REP 4->511|T1MD_MYCPN|1e-84|41.4|485/543| PROS 318->324|PS00092|N6_MTASE|PDOC00087| BL:PDB:NREP 1 BL:PDB:REP 180->464|2okcB|8e-18|30.0|253/415| RP:PDB:NREP 1 RP:PDB:REP 113->529|2ar0A|4e-31|15.5|387/476| RP:PFM:NREP 2 RP:PFM:REP 9->152|PF12161|7e-21|50.9|114/129|HsdM_N| RP:PFM:REP 180->447|PF02384|1e-58|52.4|246/273|N6_Mtase| HM:PFM:NREP 2 HM:PFM:REP 179->494|PF02384|4.6e-107|48.1|297/311|N6_Mtase| HM:PFM:REP 9->168|PF12161|3.9e-27|27.5|131/132|HsdM_N| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF02384|IPR003356| GO:PFM GO:0006306|"GO:DNA methylation"|PF02384|IPR003356| GO:PFM GO:0008170|"GO:N-methyltransferase activity"|PF02384|IPR003356| RP:SCP:NREP 1 RP:SCP:REP 183->529|2ar0A1|2e-31|19.8|324/485|c.66.1.45| HM:SCP:REP 7->530|2ar0A1|4.9e-126|41.6|442/0|c.66.1.45|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 841 OP:NHOMOORG 503 OP:PATTERN ----1--------------------1---1---1133--3112121-113137-1-----11-----1 11---113---2-3-1-11-11--1-11111-1222--1--122-3-22----111----1-1-2-1---------111122---1--1223---------1-22-2-1----------------122-44--3-1111-31--3-1-31233--11------121-3521--1----------2-------11-----12----1-----22-----311----21211211-22223222222222--111---112-1-2--122-2-2-1--111-1---1111-111111111111111111121111-433212221-3--1----11-1--1---1-1-----41122--12-1223111-11---212-111-----121---2--1-1-1111111111------------11-----112---1-1--1----12-12133333333---1------------------12--1----------------2---1---------------1-1--11111-1--1-3-1113--213-6--61311-12211-1131-2111-29---5-1321--1-16--322-1-1--1--112-22221-13333332312-1-55-1415--1-1--43-312-5-22-2--5-1--17212-------1-45-2111111112--1---222-1111111111121-1221-111-1-2122--1---111-1-1-------2----111------------1312112221-1-31333-21----121132-21-2-----11-1-421-21-1-21-111222---4-31114-1121211112222--11--1111--------2-2------2--121----2-113-2211-2-1------11 -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 453 STR:RPRED 84.8 SQ:SECSTR #######################################################################GGGcccccccccccc#####EEETTEEEcHHHHHHTTTccTTcHHHHHHHHHHHHHHHHTcHHHHccTTccHHHHHTccHHHHHHHHHHHHHHTccccHHHHHHHTTccccccHHHHHHHHHHHHHHTccccccccHHHHHHHHHHHcccTTcHHcccTTTcccEEETTcTTTHHHHHHHHHHHTTHHTcEEEEEccHHHHHHHHHHHTTTccccGGGTccEcccccEEEccTTcHHHHTcccEEEEEEccccTTccccccccccccccccHEEEEEEEcHHHHHHHHHHHEEEEEEEEEEEEHHHHHccTHHHHHHHEHHHHEEEEEEEEccccccccccccEEEEEEEEcccccEEEEEEccTTcccccccccccGGGTHHHHHHHccccccccccTTcTTcEEcccGGGTTccTTGGGccEEEEEHHHHHHEcccccHHHHHHHHHHHHHHHHHH##### DISOP:02AL 1-4, 195-197| PSIPRED ccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHccccccccEEEEEcccccccHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHcccccccccccccEEEEEcccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccEEEEEEcccEEEccccHHHHHHHHHHcccEEEEEEcccccccccccEEEEEEEEcccccccEEEEEcHHccccccccccccHHHHHHHHHHHHHccccccEEEEEEHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //