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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56968.1
DDBJ      :             Plasmid stabilization system
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.298.1
:91 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   3->82 2a6sA PDBj 4e-08 9.6 %
:RPS:SCOP  3->82 2a6qE1  d.298.1.1 * 3e-07 9.6 %
:RPS:PFM   3->87 PF05016 * Plasmid_stabil 3e-06 44.4 %
:HMM:PFM   2->86 PF05016 * Plasmid_stabil 3.2e-20 38.6 83/88  
:BLT:SWISS 3->89 Y4KP_RHISN 3e-15 41.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56968.1 GT:GENE ABA56968.1 GT:PRODUCT Plasmid stabilization system GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(479999..480274) GB:FROM 479999 GB:TO 480274 GB:DIRECTION - GB:PRODUCT Plasmid stabilization system GB:PROTEIN_ID ABA56968.1 GB:DB_XREF GI:76882287 InterPro:IPR007712 LENGTH 91 SQ:AASEQ MNKALQNLDAEAAYIAQDNPAAARRVVQTIVDAINLLSDNPALGRPGRVPGTRELVVADTHYLVPYRVRPRLQQIEVLRVFHTSRRLPEHW GT:EXON 1|1-91:0| BL:SWS:NREP 1 BL:SWS:REP 3->89|Y4KP_RHISN|3e-15|41.7|84/100| RP:PDB:NREP 1 RP:PDB:REP 3->82|2a6sA|4e-08|9.6|73/83| RP:PFM:NREP 1 RP:PFM:REP 3->87|PF05016|3e-06|44.4|81/90|Plasmid_stabil| HM:PFM:NREP 1 HM:PFM:REP 2->86|PF05016|3.2e-20|38.6|83/88|Plasmid_stabil| RP:SCP:NREP 1 RP:SCP:REP 3->82|2a6qE1|3e-07|9.6|73/84|d.298.1.1| OP:NHOMO 50 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- -2--------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1-----22-111-21-1-1------------------------------------------------------------------------1----------1-------1----1--13--------------1-------------1--------------1111---1----1-2--------------------------------------------------------------------1------------1------------------------------------1-13-----------------1--------------------------------------------------------------------------1---1-13-------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 77 STR:RPRED 84.6 SQ:SECSTR ##HHHHHHH####HHHTTcHHHHHHHHHHHHHHHHcTTccTTccEEGGGTTcEEEEccccccEEEEEEcc##cEEEEEEcccHHH###### DISOP:02AL 89-91| PSIPRED cHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccEEEEEEEcccccEEEEEEEEHHHccccccc //