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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA56999.1
DDBJ      :             NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:265 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   37->84 PF00499 * Oxidored_q3 5e-04 41.2 %
:HMM:PFM   21->221 PF00499 * Oxidored_q3 4.9e-19 22.1 136/144  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA56999.1 GT:GENE ABA56999.1 GT:PRODUCT NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 511230..512027 GB:FROM 511230 GB:TO 512027 GB:DIRECTION + GB:PRODUCT NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 GB:PROTEIN_ID ABA56999.1 GB:DB_XREF GI:76882318 InterPro:IPR001457 LENGTH 265 SQ:AASEQ MEVSPVLQWAAFGIFAFISIAGALGMATTMSMFRSGIFLMASFIGVAGLFILLLADLLALLQIMMYIGGMLVMILFMLLFSGDPGGGMMSTHMRLRGPEWFFSLGLARSPSGTDGNNANDSSDKEEDQRDQARDSHQEEGEKEESNDMSMFTPAKRGAAGLALGIGVLLIALLLWRPHWAVVAQMPDPDSPRRIGHLLMDKYMIAFEGAGLLILLGIFGAVLLQRPGKYPDSAHREELRAAVEDAPAPVKTDPLKPLGLDRDREK GT:EXON 1|1-265:0| TM:NTM 5 TM:REGION 5->27| TM:REGION 34->56| TM:REGION 60->81| TM:REGION 157->179| TM:REGION 201->223| SEG 10->25|aafgifafisiagalg| SEG 47->61|aglfillladllall| SEG 157->174|gaaglalgigvllialll| SEG 204->223|iafegagllillgifgavll| RP:PFM:NREP 1 RP:PFM:REP 37->84|PF00499|5e-04|41.2|34/150|Oxidored_q3| HM:PFM:NREP 1 HM:PFM:REP 21->221|PF00499|4.9e-19|22.1|136/144|Oxidored_q3| GO:PFM:NREP 2 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00499|IPR001457| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00499|IPR001457| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 108-151, 260-265| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccHHHcccccccccHHHcHHHHHHHHHHHHHHHHHHcccHHEEEEccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccccccccc //