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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57036.1
DDBJ      :             4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Swiss-Prot:ISPE_NITOC   RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;         Short=CMK;         EC=2.7.1.148;AltName: Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase;

Homologs  Archaea  0/68 : Bacteria  664/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
d.14.1d.58.26
:280 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->271 1oj4A PDBj 2e-63 52.1 %
:RPS:PDB   7->235 2a5zC PDBj 2e-34 9.7 %
:RPS:SCOP  4->156 1oj4A1  d.14.1.5 * 6e-61 56.2 %
:RPS:SCOP  157->271 1oj4A2  d.58.26.5 * 5e-25 40.9 %
:HMM:SCOP  1->156 1oj4A1 d.14.1.5 * 9.6e-47 44.2 %
:HMM:SCOP  157->276 1oj4A2 d.58.26.5 * 1.2e-33 46.7 %
:HMM:PFM   85->141 PF00288 * GHMP_kinases_N 1.1e-13 33.3 57/68  
:HMM:PFM   197->252 PF08544 * GHMP_kinases_C 3.9e-09 28.3 53/82  
:BLT:SWISS 1->280 ISPE_NITOC e-161 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57036.1 GT:GENE ABA57036.1 GT:PRODUCT 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 554328..555170 GB:FROM 554328 GB:TO 555170 GB:DIRECTION + GB:PRODUCT 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase GB:PROTEIN_ID ABA57036.1 GB:DB_XREF GI:76882355 InterPro:IPR004424 InterPro:IPR006204 LENGTH 280 SQ:AASEQ MLLWPAPAKLNLFLHIIGRREDGYHLLQTAFQFVDYCDWLEFRPSADGRIEHLSPLPGVPVEHDLVYRAALLLQQRTACSQGVEVRIRKHLPMGGGLGGGSSDAATTLVALNHLWETGLSISQLAQLGLELGADVPVFIYGRAAWAEGVGEQLQPLELPEPWYLIVTPAVQVSTREVFIAPELTRDCKPMTISGLLAGEGENVCEPVVRGLYPVVADALDWLSQFSPARMTGTGSSIFAAFDGKSQALAALACMPSHWQGIVAKGCNYSLLLDCLEKTGC GT:EXON 1|1-280:0| SW:ID ISPE_NITOC SW:DE RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148;AltName: Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase; SW:GN Name=ispE; OrderedLocusNames=Noc_0513; SW:KW ATP-binding; Complete proteome; Isoprene biosynthesis; Kinase;Nucleotide-binding; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->280|ISPE_NITOC|e-161|100.0|280/280| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0008299|"GO:isoprenoid biosynthetic process"|Isoprene biosynthesis| GO:SWS GO:0016301|"GO:kinase activity"|Kinase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 94->100|ggglggg| BL:PDB:NREP 1 BL:PDB:REP 4->271|1oj4A|2e-63|52.1|265/277| RP:PDB:NREP 1 RP:PDB:REP 7->235|2a5zC|2e-34|9.7|216/237| HM:PFM:NREP 2 HM:PFM:REP 85->141|PF00288|1.1e-13|33.3|57/68|GHMP_kinases_N| HM:PFM:REP 197->252|PF08544|3.9e-09|28.3|53/82|GHMP_kinases_C| RP:SCP:NREP 2 RP:SCP:REP 4->156|1oj4A1|6e-61|56.2|153/163|d.14.1.5| RP:SCP:REP 157->271|1oj4A2|5e-25|40.9|115/120|d.58.26.5| HM:SCP:REP 1->156|1oj4A1|9.6e-47|44.2|156/163|d.14.1.5|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 157->276|1oj4A2|1.2e-33|46.7|120/120|d.58.26.5|1/1|GHMP Kinase, C-terminal domain| OP:NHOMO 700 OP:NHOMOORG 682 OP:PATTERN -------------------------------------------------------------------- -11-1---------11111-11111111111111111111-----1--1-----1------1----1-----------1-1-11111111111111---------111111111111111--11111111111111-----111-1111111111111111111-11111111111111111111---11111111111111111111111111111111111111111111111111111111111-111111-1-11-1---111111111------1111111-11---------------------------------111111111111111111111111111111111111111111111111----1-----11111-11111111-11111111111111-11-11-1-111-11111111111-1-1-1-1-1111-1111111111-11--11111111111-----------------1111-111-111111111111111111111111111111111111111111111111111111111111111111111111-11111111-111--111111111------111-1-----------------1---1111111111111111111111111111111111--11111--11111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111---------111111111-11111111111111--11111111111111111111111111111111-1111111111111111111111111111111---1111--------11-----------------------------1-111-11-1 ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------11-1G111111113-1111----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 271 STR:RPRED 96.8 SQ:SECSTR cEEEEEcccccccccccHHHHHHHHTccccccccEEEEEEcccccTTccccEEEcETTccEETTEEEEEETTcEEcccEEEEEEccEEccccTTcEEEEEccTccGGGccEEEEEEEccccccTTEEEEEEEEEcTTccccEEEEEEETTEEEEEEEETTccEEccTTcEEEEEEEcTTccEEEEEEETEEEEEEcccccccccTTEEEEEEEEEccccTTcccHcEEEEEEEEEcEEEEEEHHHHHHHHHHHHHHccccGGGTEEcccHH######### PSIPRED cEEEEccEEEEEEEEEEEEccccccEEEEEEEEEcccEEEEEEEcccccEEEEcccccccccccHHHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEccEEEEEEcccEEEEccccccEEEEEEccccccHHHHHHccccccccccccHHHHHHcccccccHHHHHHHcHHHHHHHHHHHHcccEEEEccccEEEEEEccHHHHHHHHHHHHHHccEEEEccccHHHHHHHHHHccc //