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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57075.1
DDBJ      :             Conserved hypothetical protein 730
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  363/915 : Eukaryota  27/199 : Viruses  0/175   --->[See Alignment]
c.129.1
:241 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->219 1wekB PDBj 3e-47 45.8 %
:RPS:PDB   45->219 2a33B PDBj 4e-28 21.2 %
:RPS:SCOP  47->222 1wehA  c.129.1.1 * 1e-53 26.3 %
:HMM:SCOP  41->223 2q4dA1 c.129.1.1 * 1.4e-59 39.2 %
:RPS:PFM   46->106 PF02481 * DNA_processg_A 9e-07 35.6 %
:RPS:PFM   89->219 PF03641 * Lysine_decarbox 6e-22 41.1 %
:HMM:PFM   89->219 PF03641 * Lysine_decarbox 3.9e-34 39.2 130/133  
:HMM:PFM   34->98 PF02481 * DNA_processg_A 2e-07 30.2 63/212  
:BLT:SWISS 47->225 Y4923_PSEAE 4e-10 28.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57075.1 GT:GENE ABA57075.1 GT:PRODUCT Conserved hypothetical protein 730 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 600443..601168 GB:FROM 600443 GB:TO 601168 GB:DIRECTION + GB:PRODUCT Conserved hypothetical protein 730 GB:PROTEIN_ID ABA57075.1 GB:DB_XREF GI:76882394 InterPro:IPR005269 LENGTH 241 SQ:AASEQ MSKQNKRSFTERKAINDSLLIRESWKVFQIMAEFVEGFERLATIRPSVSIFGSARMAPEHPYYQLTEKIARALSDAGFSVVSGGGPGLMEAANKGAFTGISPSVGLNISLPREPGANEYQDIAVNFRHFFSRKVMFVKYASAYVVLPGGFGTLDELAEILTLVQTGKSRRIPIILVQSSFWAGLIDWFKEYLVEEGMIDRHDLDLFKILDKPQEVVDAIFSFYESRSFEPSAEERERLLNL GT:EXON 1|1-241:0| BL:SWS:NREP 1 BL:SWS:REP 47->225|Y4923_PSEAE|4e-10|28.2|174/195| BL:PDB:NREP 1 BL:PDB:REP 17->219|1wekB|3e-47|45.8|201/206| RP:PDB:NREP 1 RP:PDB:REP 45->219|2a33B|4e-28|21.2|165/170| RP:PFM:NREP 2 RP:PFM:REP 46->106|PF02481|9e-07|35.6|59/209|DNA_processg_A| RP:PFM:REP 89->219|PF03641|6e-22|41.1|129/131|Lysine_decarbox| HM:PFM:NREP 2 HM:PFM:REP 89->219|PF03641|3.9e-34|39.2|130/133|Lysine_decarbox| HM:PFM:REP 34->98|PF02481|2e-07|30.2|63/212|DNA_processg_A| GO:PFM:NREP 1 GO:PFM GO:0009294|"GO:DNA mediated transformation"|PF02481|IPR003488| RP:SCP:NREP 1 RP:SCP:REP 47->222|1wehA|1e-53|26.3|167/171|c.129.1.1| HM:SCP:REP 41->223|2q4dA1|1.4e-59|39.2|181/0|c.129.1.1|1/1|MoCo carrier protein-like| OP:NHOMO 500 OP:NHOMOORG 391 OP:PATTERN ---------------------------------1---------------------------------- 121111111112121---------------------1111111111111---111111--111-1111211-111111----11111111---------112121111-1-------1-1----23313232211311111--1-1131111111111-1--11-1111111--111--11-1--111--1----------------------------------------------------------------------------------11--11-------------------------------------------1--------------------------------------------------111111111111----2--2---1-22222222222-------1-22--222221211122--111111122112211111111-111111-------------------------------11111111112223211212233232222-222212231122211112111111---1111111111111121221-111111111-1111111111121--1---11-1111111111---------1111111-------1--------------------1----2111--------------------------------------------------------------------------------------------------1111--1-----------------11111111111-12112211111111111111111111-------------------------------1111--------------------------------------------------111 1-------421---1--------------------------------------------------1-----1-----1----------------------1--1----3-------------------------------------------------1----1---------3-21-1A11111--13-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 233 STR:RPRED 96.7 SQ:SECSTR ########HHHHHccHHHHHHccHHHHHHHHHHHHHHTTcccTTccEEEEEccccccccHHHHHHHHHHHHHHHHTTcEEEEcccccHHHHHHHHHHHTTccEEEEGGcEEccccccEEHHHHHHEEEccHHHHHHHHTccEEEEccccHHHHHHHHHHHHHHHTTcccccEEEEcGGGTTHHHHHHHHHHHHHTTcccHHHHTTEEEEccHHHHHHHHcTTTTccccTTcGGGEEccccc DISOP:02AL 1-8| PSIPRED ccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHccccEEEEcccccccccccccEEEEEEEccHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHHHHcccccHHHccEEEEEccHHHHHHHHHHHcccccccccccccccEEcc //