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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57084.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:504 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   5->159 PF03235 * DUF262 1e-07 37.7 %
:RPS:PFM   417->496 PF07510 * DUF1524 2e-04 29.1 %
:HMM:PFM   2->161 PF03235 * DUF262 9.7e-22 27.3 154/224  
:HMM:PFM   408->497 PF07510 * DUF1524 1.3e-15 29.9 87/88  
:HMM:PFM   171->202 PF00804 * Syntaxin 0.00052 34.4 32/103  
:BLT:SWISS 136->252 SYE1_NITSB 4e-04 34.5 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57084.1 GT:GENE ABA57084.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 612237..613751 GB:FROM 612237 GB:TO 613751 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA57084.1 GB:DB_XREF GI:76882403 LENGTH 504 SQ:AASEQ MGHFLFEEKTQKFNVIDGQQRLTTIVIFLSVLFAQLKSIRDLSEEEEICYEDMVKRRSAIRFWTVDYDNQLFIDYVIDQSKSEHNGLETESSRRIVSAFDFFKNHLSDKPEEYLTKMLLIVAGAACTTHPVQNESEAIQMFIFQNSRGKRPSNLEIVKAQFMHHAHLHGGAKDEVDSLIGEIKGRFEKIYKSISSIEYRINEDDVLLYTLRVHFNSLWETNSLDKINKMLADGNPLDFIKSFSRSLSTSFEHLSQFFGKHERENFAIHSLISLGGIAVALPFVIKAYRYGLSLDQIGKLCWSLESLVLRHRLIGTRANIISRINDVFEKFTESNKDISPVIDHIEWMKTTDDWWWAYWNNDRLKESIQGGINHSTAKYLLWKYEVHLEQQGKAGYSPIRFDNIISPELEHIAPTTEPESKPHGYDDYDDEFRNQYLNTLGNYLLLSKSHNCAVGNILLSQKLATYTHNEQQREVRSLVPKNGIWSKEIIQQRKNKIIGVIMIIC GT:EXON 1|1-504:0| BL:SWS:NREP 1 BL:SWS:REP 136->252|SYE1_NITSB|4e-04|34.5|116/100| TM:NTM 2 TM:REGION 19->41| TM:REGION 264->286| RP:PFM:NREP 2 RP:PFM:REP 5->159|PF03235|1e-07|37.7|130/200|DUF262| RP:PFM:REP 417->496|PF07510|2e-04|29.1|79/87|DUF1524| HM:PFM:NREP 3 HM:PFM:REP 2->161|PF03235|9.7e-22|27.3|154/224|DUF262| HM:PFM:REP 408->497|PF07510|1.3e-15|29.9|87/88|DUF1524| HM:PFM:REP 171->202|PF00804|0.00052|34.4|32/103|Syntaxin| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 81-91| PSIPRED ccEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccEEEEcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEcccccHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHc //