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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57134.1
DDBJ      :             Phage integrase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  328/915 : Eukaryota  1/199 : Viruses  7/175   --->[See Alignment]
d.163.1
:399 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->95 3ju0A PDBj 9e-14 37.0 %
:BLT:PDB   106->362 1z1bB PDBj 3e-08 25.4 %
:RPS:PDB   98->377 5crxA PDBj 2e-27 11.6 %
:RPS:SCOP  98->384 1p7dA  d.163.1.1 * 9e-25 17.9 %
:HMM:SCOP  202->384 1a0pA2 d.163.1.1 * 2.3e-31 31.0 %
:RPS:PFM   226->370 PF00589 * Phage_integrase 2e-13 38.2 %
:HMM:PFM   203->375 PF00589 * Phage_integrase 5.3e-28 24.7 166/173  
:BLT:SWISS 2->391 INTZ_ECOLI 1e-49 36.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57134.1 GT:GENE ABA57134.1 GT:PRODUCT Phage integrase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 663624..664823 GB:FROM 663624 GB:TO 664823 GB:DIRECTION + GB:PRODUCT Phage integrase GB:PROTEIN_ID ABA57134.1 GB:DB_XREF GI:76882453 InterPro:IPR002104 LENGTH 399 SQ:AASEQ MLTDTKLRNLKPKDKLYKVNDRDGLYVAVTPAGTISFRHNYSISGRQETLTIGRYGTGGITLAEARERLSEAKKMITAGKSPAREKARDKARVKDAETFGAWAEKWMRGYQMADSTRDMRKSVYNRELKKRFGNQKLSEITHEDLRAVTDSIVERGAPATAVHAREVVLQVFRWAIERGQKVENPAELVRPTSIARFEPRDRALSPAEIGLMYRYMDRVGTSPQYRAAIKLLLLTMVRKSELSNATWSEINFSEALWTIPKERMKRRNPHLVFLSRQALDIFIALKTFAGGSEFVLPSRYDSDIPMSAATLNRVLALTYRAAQKDGKQLSKFGPHDLRRTASTLLHESGYNTDWIEKCLAHEQKGVRAIYNKAEYREQRVEMLQDWADMIDEWTNVKRQ GT:EXON 1|1-399:0| BL:SWS:NREP 1 BL:SWS:REP 2->391|INTZ_ECOLI|1e-49|36.6|377/402| BL:PDB:NREP 2 BL:PDB:REP 2->95|3ju0A|9e-14|37.0|92/95| BL:PDB:REP 106->362|1z1bB|3e-08|25.4|244/349| RP:PDB:NREP 1 RP:PDB:REP 98->377|5crxA|2e-27|11.6|277/297| RP:PFM:NREP 1 RP:PFM:REP 226->370|PF00589|2e-13|38.2|136/168|Phage_integrase| HM:PFM:NREP 1 HM:PFM:REP 203->375|PF00589|5.3e-28|24.7|166/173|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 98->384|1p7dA|9e-25|17.9|279/280|d.163.1.1| HM:SCP:REP 202->384|1a0pA2|2.3e-31|31.0|174/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 959 OP:NHOMOORG 336 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------1----------------1----------2--------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-11------313325525-12--1---1-112-1-221211264--11---1---11-542-21-21-21123333333343--34-1----------17--11---1----------3212--1-172112251-1----2343315413712-3-1423552931322234115--22512--1-1-63724----21--1-1-1--2-62121361-1---1-21111-2--21-1----------11---23251221-41-122111323314113----31222------4377143378936764219542699197844433445473787325812151332343321265357733-266625556437---------22141-1--1---4--2--134213--425-2321--112-12431433231-1----3---121-345344321261-32523---2111----------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------9------------------------------------------------------- --------------------1-----------------------------------1---1------------------------------------1---------------------------------------------1------------------1---1-------- STR:NPRED 388 STR:RPRED 97.2 SQ:SECSTR #ccHHHTTEEEEEEEEcTTccccccEEEEcccccccccccTTcTTTTTTTcEEEEEEEccTTccGGGccccccEEEcccHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcccccGGGcHHHHHHHHHHHHHHHTTTccccccccccHHHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccTTcccccTTccccccccHHHHHHHHHHHHHTccccTTccTTccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccTTHHHHHHHHHHHHccccHHHHHHTTTcccTTcccccHHHHHHcccHHHHHHHTcc########## DISOP:02AL 192-200, 397-399| PSIPRED cccHHHHHcccccccEEEEccccEEEEEEEEccEEEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHcccHHHccccccEEEEcccccccccEEEEcccHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //