[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57156.1
DDBJ      :             Transposase IS3/IS911
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  187/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:88 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  2->52 1hcrA  a.4.1.2 * 3e-05 13.7 %
:HMM:SCOP  1->41 1hcrA_ a.4.1.2 * 0.00037 26.8 %
:HMM:PFM   2->72 PF01527 * Transposase_8 9.8e-22 29.6 71/76  
:BLT:SWISS 1->87 YIA3_RHISP 7e-25 54.0 %
:COIL

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57156.1 GT:GENE ABA57156.1 GT:PRODUCT Transposase IS3/IS911 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 683663..683929 GB:FROM 683663 GB:TO 683929 GB:DIRECTION + GB:PRODUCT Transposase IS3/IS911 GB:PROTEIN_ID ABA57156.1 GB:DB_XREF GI:76882475 InterPro:IPR002514 LENGTH 88 SQ:AASEQ MKRSRFTESQIVSILKEADAGAKIKDLCRKHGISDATYYNWKAKYGGMSTSDLRRLKETEAELSQYKKMYAELAHENYALKDLIEKKL GT:EXON 1|1-88:0| BL:SWS:NREP 1 BL:SWS:REP 1->87|YIA3_RHISP|7e-25|54.0|87/88| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 53->82| HM:PFM:NREP 1 HM:PFM:REP 2->72|PF01527|9.8e-22|29.6|71/76|Transposase_8| RP:SCP:NREP 1 RP:SCP:REP 2->52|1hcrA|3e-05|13.7|51/52|a.4.1.2| HM:SCP:REP 1->41|1hcrA_|0.00037|26.8|41/52|a.4.1.2|1/1|Homeodomain-like| OP:NHOMO 1233 OP:NHOMOORG 187 OP:PATTERN -------------------------------------------------------------------- 4--1-----------------1--1-------2156-----------3---------------------------------------------------------8-4----------------2------21--3-----143-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---44------11218--1421--1---------6-231----5-3--11114--4435--9--4B4--6--65-KJKKKKKK2BB2-8--------------------------------8-----1--D223G2-3****13-15CB7121731111----9---1-11--1--1------3---------D--1------956-123-----11----2--11---------------------------------14----1------13------3---1----1---------1-1-312---1-11----------13-----------14511----422222-11--1-212---------635454255154---------122-3--------------------------4-6-21313-----1---2---------------------------1-DJWJNPZb--------11---------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 48-57| PSIPRED cccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //