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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57164.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  56/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:274 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   36->274 PF11920 * DUF3438 2e-37 46.6 %
:HMM:PFM   34->274 PF11920 * DUF3438 2.1e-70 39.0 241/288  
:BLT:SWISS 111->228 OTUD4_HUMAN 3e-04 26.3 %
:PROS 232->243|PS00213|LIPOCALIN
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57164.1 GT:GENE ABA57164.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 692218..693042 GB:FROM 692218 GB:TO 693042 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA57164.1 GB:DB_XREF GI:76882483 InterPro:IPR002345 LENGTH 274 SQ:AASEQ MNVTDYYVPVKWIALLWSCFLGLCFPLVSFAQVDDAASNSPERIVWNKAPIAIPLVVSEERLVHFPDSVSIGLPQSLTPFLRSQSINGTLYLLARQPFETTRVMVRSETDGPIYVLDISASPSGSDSRSLPDVRILLESPQDAGAAESTSDNRSLSLGYATLTRYAAQQLYAPTRLIPHQSGVVAMPVNAEPVDLVHGAKVEAVPVAAWKVGLKYVTAVKLTNRTQRPLVLDPRELRGSWLAATFQHNRLLPAGNAADTTAVYLVSDRPFDVAL GT:EXON 1|1-274:0| BL:SWS:NREP 1 BL:SWS:REP 111->228|OTUD4_HUMAN|3e-04|26.3|114/1114| PROS 232->243|PS00213|LIPOCALIN|PDOC00187| TM:NTM 1 TM:REGION 11->33| RP:PFM:NREP 1 RP:PFM:REP 36->274|PF11920|2e-37|46.6|238/281|DUF3438| HM:PFM:NREP 1 HM:PFM:REP 34->274|PF11920|2.1e-70|39.0|241/288|DUF3438| OP:NHOMO 67 OP:NHOMOORG 56 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------4-----------------------1---1--1---12311-----1-1--------------1-2-------------------------1-------------------------------------1-1----------------------------1--1---------11-------------------1--------------11--1111--------11-1--3---------1--------1-----------1212-----------11----11-----------1--11--111---11-1-1--------------------------1-111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 124-129, 131-133, 137-156| PSIPRED ccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccEEEEEccccEEEccccccEEEEEcccEEEEcccccccccEEEEEEccEEEEEEcccccccEEEEEEcccccEEEEEEEEccccccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEcccccccccccccccEEEEEEEEEEcccEEEEEEEEEcccccEEEEcHHHHcccEEEEEEccccccccccccccEEEEEEEcccccccc //