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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57195.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  860/915 : Eukaryota  36/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->228 2oqrA PDBj 6e-32 30.8 %
:RPS:PDB   1->227 3c3wB PDBj 2e-23 19.9 %
:RPS:SCOP  3->105 1a0oA  c.23.1.1 * 9e-25 33.0 %
:RPS:SCOP  130->228 1gxpA  a.4.6.1 * 1e-22 29.6 %
:HMM:SCOP  1->195 1s8nA_ c.23.1.1 * 9e-39 31.6 %
:RPS:PFM   4->105 PF00072 * Response_reg 3e-14 41.2 %
:RPS:PFM   153->228 PF00486 * Trans_reg_C 5e-10 40.8 %
:HMM:PFM   4->112 PF00072 * Response_reg 1.6e-28 37.6 109/112  
:HMM:PFM   153->228 PF00486 * Trans_reg_C 5.5e-22 44.7 76/77  
:HMM:PFM   116->164 PF11773 * PulG 4e-05 24.5 49/82  
:BLT:SWISS 1->227 CPXR_SHIFL 9e-41 41.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57195.1 GT:GENE ABA57195.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(733591..734286) GB:FROM 733591 GB:TO 734286 GB:DIRECTION - GB:PRODUCT two component transcriptional regulator, winged helix family GB:PROTEIN_ID ABA57195.1 GB:DB_XREF GI:76882514 InterPro:IPR001789 InterPro:IPR001867 LENGTH 231 SQ:AASEQ MNRILLADDDIELCGMLKQYLEVEGFQVGMAHGGESALNQARTGGYDLAVLDVMMPQLNGFDVLRELRKDSLVPVLMLTARGEDVDSIIGLELGADDYLPKPCNPRVLVARIRAILRRLQSQTQHGEKSAPPEILKLDDLEVQTGSRTVALNGRPVTMTSTEYSVLEVLLREAGHVVSKAELSERALGRELTRYDRSIDMHLSSLRKKLGPLTNGEERIKTVRGVGYQYTR GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 1->227|CPXR_SHIFL|9e-41|41.1|224/232| SEG 106->119|rvlvarirailrrl| BL:PDB:NREP 1 BL:PDB:REP 4->228|2oqrA|6e-32|30.8|221/226| RP:PDB:NREP 1 RP:PDB:REP 1->227|3c3wB|2e-23|19.9|206/210| RP:PFM:NREP 2 RP:PFM:REP 4->105|PF00072|3e-14|41.2|102/111|Response_reg| RP:PFM:REP 153->228|PF00486|5e-10|40.8|76/77|Trans_reg_C| HM:PFM:NREP 3 HM:PFM:REP 4->112|PF00072|1.6e-28|37.6|109/112|Response_reg| HM:PFM:REP 153->228|PF00486|5.5e-22|44.7|76/77|Trans_reg_C| HM:PFM:REP 116->164|PF11773|4e-05|24.5|49/82|PulG| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 3->105|1a0oA|9e-25|33.0|103/128|c.23.1.1| RP:SCP:REP 130->228|1gxpA|1e-22|29.6|98/103|a.4.6.1| HM:SCP:REP 1->195|1s8nA_|9e-39|31.6|187/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 11677 OP:NHOMOORG 913 OP:PATTERN -----------------------------1--------1111-35-2H-7314-1-1-12-------- 7KK5O466778545BBBBB-BE44BCBBBBB8IEGFAEHDBDDEAA677777BDG45711IGL5O7HPLN9444465558JB713698FFWL-E22---55G48AM6M9J1---------11112423432443B3USSWTG8EX5nRecSREJKGI7679A8ONGFlnxJ474554564544EE699331B7JUUVUVRUVIVTXWURGJGEDGUWc9BEW8GGA99A9Aka79999998999999979886A675CC545466666CC655575575DED766889988888898888555556666765586655465676VOMfRRRVVVWUSNEcYYAEGCQMH8ADGOC5hbPDC736858796327HFAGGGF56556HFQOPGAEGOIKMBBABBBBBA9E-JLPJKOJQCNA1QJJNKHMPOJKJEN9DCEAFHEHHADACCCCCCCCACC89OHB2222222211112333323223223222237BE56DDC9ETUWVZSOIIIEPPTXKJLKCLYSTMVOZ12JPNWENHHYMMLN9GNLDAACI61211111A94FRdEZWLB7R97PVCDE-dRbSTTUDEJJKJXXEOB6854444446232322222AG5AG66JH9HKJM9JGDNGMMJDJHMMMKMKJMLRR--35988------EGEFDFBGGGHGGHIFG-GIHFGGGFGHGGGGGGGGEKIJCF878FEFEFEFFDEEDEDEEGEDDEEFG91DEEEFFFEEFFF--2D333334544BFW9M333433244443125CBABC7C99BJGTRUTPbabIVYYUKRPW2212132125EFFQHHHHHIILOPPSIHKHIFFD7767--W2886677211212223-2-------------------------4A455867774L3 ----12--------3---------------------------------11-------------1--------1-1--------1-1-1--2---11111-111243--2-------------------------------------------------2----2-1-------3-232-------4-1E---2-B---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 230 STR:RPRED 99.6 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTcTEEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHGTTTHHHHHHHHccTTTTccHHHHHHHHHHTTTccHHHHccccccTTHHHHHTccHHHHHHHHHHHHHHTTTcccccHHHHHHHHHTcEEc# DISOP:02AL 120-133| PSIPRED ccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHHccccccccEEEEEEccEEEEcc //