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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57210.1
DDBJ      :             Resolvase-like
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  299/915 : Eukaryota  1/199 : Viruses  2/175   --->[See Alignment]
a.4.1a.4.12c.53.1
:190 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->183 1zr2B PDBj 3e-14 26.1 %
:RPS:PDB   3->119 3bvpA PDBj 2e-20 25.6 %
:RPS:PDB   143->185 1bibA PDBj 1e-04 14.0 %
:RPS:SCOP  2->124 1gdtA2  c.53.1.1 * 4e-33 30.9 %
:RPS:SCOP  107->185 2oa4A1  a.4.12.3 * 1e-08 13.3 %
:HMM:SCOP  1->137 1gdtA2 c.53.1.1 * 3.7e-41 57.7 %
:HMM:SCOP  138->190 1hcrA_ a.4.1.2 * 1.3e-05 28.8 %
:RPS:PFM   4->124 PF00239 * Resolvase 2e-17 46.3 %
:HMM:PFM   3->135 PF00239 * Resolvase 2.4e-45 55.6 133/141  
:HMM:PFM   138->180 PF02796 * HTH_7 5.3e-10 35.7 42/45  
:BLT:SWISS 1->124 DNIV_BPP1 2e-28 49.2 %
:PROS 5->13|PS00397|RECOMBINASES_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57210.1 GT:GENE ABA57210.1 GT:PRODUCT Resolvase-like GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(751599..752171) GB:FROM 751599 GB:TO 752171 GB:DIRECTION - GB:PRODUCT Resolvase-like GB:PROTEIN_ID ABA57210.1 GB:DB_XREF GI:76882529 InterPro:IPR006118 InterPro:IPR006119 InterPro:IPR006120 LENGTH 190 SQ:AASEQ MKIGYARASTLDQNPSLQRDALEAAGCEKMIVDQISGTVAKRPGLEKVKELLREEDTLVVWRLDRLGRSLRDLIEQIRTLDAQRVGLQSLHESIDTTTPTGRLTFHLFGALAEFERNLIQERTQAGLAAARARGRLGGRRKSLNSDKRALVVSLYEEKKLPVTKICEMMGISKPTLYSYVREAQEKTNRV GT:EXON 1|1-190:0| BL:SWS:NREP 1 BL:SWS:REP 1->124|DNIV_BPP1|2e-28|49.2|124/186| PROS 5->13|PS00397|RECOMBINASES_1|PDOC00334| SEG 62->73|rldrlgrslrdl| SEG 125->140|aglaaarargrlggrr| BL:PDB:NREP 1 BL:PDB:REP 4->183|1zr2B|3e-14|26.1|176/182| RP:PDB:NREP 2 RP:PDB:REP 3->119|3bvpA|2e-20|25.6|117/136| RP:PDB:REP 143->185|1bibA|1e-04|14.0|43/294| RP:PFM:NREP 1 RP:PFM:REP 4->124|PF00239|2e-17|46.3|121/141|Resolvase| HM:PFM:NREP 2 HM:PFM:REP 3->135|PF00239|2.4e-45|55.6|133/141|Resolvase| HM:PFM:REP 138->180|PF02796|5.3e-10|35.7|42/45|HTH_7| GO:PFM:NREP 3 GO:PFM GO:0000150|"GO:recombinase activity"|PF00239|IPR006119| GO:PFM GO:0003677|"GO:DNA binding"|PF00239|IPR006119| GO:PFM GO:0006310|"GO:DNA recombination"|PF00239|IPR006119| RP:SCP:NREP 2 RP:SCP:REP 2->124|1gdtA2|4e-33|30.9|123/140|c.53.1.1| RP:SCP:REP 107->185|2oa4A1|1e-08|13.3|75/93|a.4.12.3| HM:SCP:REP 1->137|1gdtA2|3.7e-41|57.7|137/140|c.53.1.1|1/1|Resolvase-like| HM:SCP:REP 138->190|1hcrA_|1.3e-05|28.8|52/52|a.4.1.2|1/1|Homeodomain-like| OP:NHOMO 698 OP:NHOMOORG 307 OP:PATTERN --------------------------------------1-311--------------------1---- -2---1-11151-22------1--2---------1-2375--211-11-11-659--1---1---1--11-1---------1-------1------2----------1----------------1-------21-4--------3-1--1-------------22----1-------------------------1-11--51-46--5-------22-------1----1--321121---111--1-21311-1-21------2--1-11121--21-------------2----------------------------------------------111----------------------------------3---------1-1-2--1----2221221-214-3352423814--51132123---1-3--1912221-11-888888888312-3-2------------1-----2------------15-2-----311-3-1--------34-252-52---8--33-1-53122---2--4-1-----------361-12--6-2----3-----1-11-1--9------------------------------------3-16-------3125-3-1--423--3-----2----------11111-321131-311-2233-31111212332332312--22-12--14-13-2433-3-2-311111--11111-11-1---5------21121----------12----1--3-2-1------1112----1----22-311--------------1--11------5151----2121----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------9---------------------------- ----------------------------11------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 185 STR:RPRED 97.4 SQ:SECSTR ccEEEEEEccccGGGcHHHHHHHHHHHHTEEEETccccccccHHHHHHHHGGGGTcEEEEccHHHHcccHHHHHHHHHHTTGGGcEEEETTTTEETTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccccccHHHHHHHHHHTTcccccHHHHHHHHTccHHHHHHHHHHHHH##### DISOP:02AL 184-190| PSIPRED cEEEEEEEccccccHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccc //