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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57211.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  89/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:101 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->81 3cecA PDBj 1e-09 34.6 %
:RPS:PDB   5->82 3cecA PDBj 6e-20 33.8 %
:RPS:SCOP  8->94 2icpA1  a.35.1.3 * 1e-07 27.9 %
:HMM:SCOP  2->68 2a6cA1 a.35.1.13 * 1.9e-08 34.8 %
:HMM:PFM   19->57 PF01381 * HTH_3 2e-11 38.5 39/55  
:BLT:SWISS 1->57 Y2319_SYNE7 5e-14 50.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57211.1 GT:GENE ABA57211.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(752370..752675) GB:FROM 752370 GB:TO 752675 GB:DIRECTION - GB:PRODUCT transcriptional regulator, XRE family GB:PROTEIN_ID ABA57211.1 GB:DB_XREF GI:76882530 InterPro:IPR001387 LENGTH 101 SQ:AASEQ MMINPPHPGELLREDVIAELGLTVKETADRLGISRVALSRVLNGRAAISPDLALRLEMAGVSTAHTWLAMQVNFDLALARQRSHPPIRALQSAEQTEQLRG GT:EXON 1|1-101:0| BL:SWS:NREP 1 BL:SWS:REP 1->57|Y2319_SYNE7|5e-14|50.9|57/70| BL:PDB:NREP 1 BL:PDB:REP 3->81|3cecA|1e-09|34.6|78/90| RP:PDB:NREP 1 RP:PDB:REP 5->82|3cecA|6e-20|33.8|77/90| HM:PFM:NREP 1 HM:PFM:REP 19->57|PF01381|2e-11|38.5|39/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 8->94|2icpA1|1e-07|27.9|86/87|a.35.1.3| HM:SCP:REP 2->68|2a6cA1|1.9e-08|34.8|66/0|a.35.1.13|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 121 OP:NHOMOORG 89 OP:PATTERN -------------------------------------------------------------------- 1-2--2---------------------------------1----------------------------------------1--------------------------31------------------------1------------1-----1--11----------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111--24-3--1--2-21--------------1---1---2---1-1----------11------1---------------111---12--------------------------------2--------1111----------1-----1----1-------------11----1-----1-1-----31-2-----1--1--1-1----1----2-1---------------------------------1--------11-----1-----------------35--1------------1---------1-------------------------22---------------------------1-------------1-------------21---1-------3---------1---1-----21-1--1---1--------------1---------------------1121----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 101 STR:RPRED 100.0 SQ:SECSTR cccccccHHHHHHHHHHHHHTccHHHHHHHHTccHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHc DISOP:02AL 1-3, 92-101| PSIPRED cccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccc //